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     data   graph     files  public [Samples Sequenced for Metabarcoding] - Cyanobacterial and diatom samples collecteced between
April and September 2022, and sequenced for metabarcodig of 16S and rbcL. (Collaborative
Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration
in microbial mats of Lake Huron’s sinkholes)
   ?            M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_911441_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.911441.1
attribute NC_GLOBAL Easternmost_Easting double -81.20842
attribute NC_GLOBAL geospatial_lon_max double -81.20842
attribute NC_GLOBAL geospatial_lon_min double -83.45596
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/911441 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String These data are the sample information for each of the samples collected for metabarcoding of 16S and rbcL to describe Cyanobacterial and diatom diversity, respectively, in three sites in Alpena, Michigan, one site in Monroe, Michigan, and one site in Palm Coast, Florida. Sample data are for sequenced samples and include their associated water parameter information that was collected simultaneously.
Each of these sites are high-sulfur, low-oxygen environments formed by underwater sinkholes and springs that create extreme habitats populated by microbial mat communities. Our study investigated previously undescribed diatom diversity in these habitats, and further explored the bacterial communities as well. Our results provide novel information on microbial mat community composition, and present evidence that microbial biogeography influences these unique communities.
attribute NC_GLOBAL title String [Samples Sequenced for Metabarcoding] - Cyanobacterial and diatom samples collecteced between April and September 2022, and sequenced for metabarcodig of 16S and rbcL. (Collaborative Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron’s sinkholes)
attribute NC_GLOBAL Westernmost_Easting double -83.45596
variable SampleID   String  
attribute SampleID long_name String Sampleid
attribute SampleID units String unitless
variable Collection_ID   String  
attribute Collection_ID long_name String Collection_id
attribute Collection_ID units String unitless
variable Collection_Date   String  
attribute Collection_Date long_name String Collection_date
attribute Collection_Date units String unitless
variable Location   String  
attribute Location long_name String Location
attribute Location units String unitless
variable Lat   float  
attribute Lat actual_range float 29.63172, 45.19839
attribute Lat long_name String Lat
attribute Lat units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -83.45596, -81.20842
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Long
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable Sample_Type   String  
attribute Sample_Type long_name String Sample_type
attribute Sample_Type units String unitless
variable Temp   float  
attribute Temp actual_range float 8.9, 23.4
attribute Temp long_name String Temp
attribute Temp units String Celsius (°C)
variable Cond   int  
attribute Cond actual_range int 1604, 4670
attribute Cond long_name String Cond
attribute Cond units String Microsiemens / centimeter (μS/cm)
variable TDS   float  
attribute TDS actual_range float 1.042, 2.74
attribute TDS long_name String Tds
attribute TDS units String Grams/liter (g/L)
variable pH   float  
attribute pH actual_range float 7.0, 7.85
attribute pH long_name String Ph
attribute pH units String unitless
variable NTU   float  
attribute NTU actual_range float -0.2, 7.3
attribute NTU long_name String Ntu
attribute NTU units String Nephelometric Turbidity Units (NTU)
variable ODO   float  
attribute ODO actual_range float 6.2, 57.5
attribute ODO long_name String Odo
attribute ODO units String Percentage saturation
variable ODO_mg_L   float  
attribute ODO_mg_L actual_range float 0.68, 6.18
attribute ODO_mg_L long_name String Odo_mg_l
attribute ODO_mg_L units String Milligrams/liter (mg/L)
variable Cl_mg_L   int  
attribute Cl_mg_L actual_range int 32, 1842
attribute Cl_mg_L long_name String Cl_mg_l
attribute Cl_mg_L units String Milligrams/liter (mg/L)
variable SO4_mg_L   int  
attribute SO4_mg_L actual_range int 626, 1327
attribute SO4_mg_L long_name String So4_mg_l
attribute SO4_mg_L units String Milligrams/liter (mg/L)
variable NO3_N_mg_L   float  
attribute NO3_N_mg_L actual_range float 0.46, 1.15
attribute NO3_N_mg_L long_name String No3_n_mg_l
attribute NO3_N_mg_L units String Milligrams/liter (mg/L)
variable Si_mg_L   float  
attribute Si_mg_L actual_range float 8.42, 16.88
attribute Si_mg_L long_name String Si_mg_l
attribute Si_mg_L units String Milligrams/liter (mg/L)
variable SRP_P_mg_L   String  
attribute SRP_P_mg_L long_name String Srp_p_mg_l
attribute SRP_P_mg_L units String Milligrams/liter (mg/L)
variable NCBI_BioProject   String  
attribute NCBI_BioProject long_name String Ncbi_bioproject
attribute NCBI_BioProject units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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