ERDDAP > info > bcodmo_dataset_918220_v1

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[qPCR assays] - Results from qPCR assays to quantify the abundance and photochemical performance of symbionts relative to coral cells in three coral species collected from colonies in southeast Florida in April and October 2019 before, during, and after heat stress tests (Collaborative Research: Assessing the changing symbiotic milieu on Caribbean coral reefs under climate change: magnitude, tradeoffs, interventions, and implications)		M	background			BCO-DMO	bcodmo_dataset_918220_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.918220.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-80.0974
attribute	NC_GLOBAL	geospatial_lon_max	double	-80.0974
attribute	NC_GLOBAL	geospatial_lon_min	double	-80.1005
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/918220
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	summary	String	This dataset contains results from assays to quantify the abundance and photochemical performance of Breviolum, Cladocopium, and Durusdinium symbionts relative to coral cells in Montastraea cavernosa, Orbicella faveolata, and Siderastrea siderea corals collected from colonies in southeast Florida in April 2019 and in October 2019, before, during and after aquarium-based experimental heat stress tests. Bulk genomic DNA was extracted from tissue scrapings taken from 2.5cm diameter cores of corals and was used as a template for symbiont genus-specific qPCR assays. The resulting CT values were used to calculate the relative abundance of each symbiont genus within each coral core over the course of the heat stress. The photochemical efficiency of each coral core was also measured periodically throughout heat stress tests using an imaging pulse amplitude modulated (I-PAM) fluorometer. The publication based on these data is Buzzoni, et al. (2023) (DOI: 10.1007/s00338-023-02428-x).
attribute	NC_GLOBAL	title	String	[qPCR assays] - Results from qPCR assays to quantify the abundance and photochemical performance of symbionts relative to coral cells in three coral species collected from colonies in southeast Florida in April and October 2019 before, during, and after heat stress tests (Collaborative Research: Assessing the changing symbiotic milieu on Caribbean coral reefs under climate change: magnitude, tradeoffs, interventions, and implications)
attribute	NC_GLOBAL	Westernmost_Easting	double	-80.1005
variable	Species		String
attribute	Species	long_name	String	Species
attribute	Species	units	String	unitless
variable	Treatment		String
attribute	Treatment	long_name	String	Treatment
attribute	Treatment	units	String	unitless
variable	Core		String
attribute	Core	long_name	String	Core
attribute	Core	units	String	unitless
variable	Collection_Latitude		float
attribute	Collection_Latitude	actual_range	float	25.6773, 25.6788
attribute	Collection_Latitude	long_name	String	Collection_latitude
attribute	Collection_Latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-80.1005, -80.0974
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Collection_longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Timepoint		String
attribute	Timepoint	long_name	String	Timepoint
attribute	Timepoint	units	String	unitless
variable	Sym_Host		float
attribute	Sym_Host	actual_range	float	0.0, 0.5036345
attribute	Sym_Host	long_name	String	Sym_host
attribute	Sym_Host	units	String	unitless
variable	Y2		float
attribute	Y2	actual_range	float	0.053, 0.61
attribute	Y2	long_name	String	Y2
attribute	Y2	units	String	unitless
variable	PropD		float
attribute	PropD	actual_range	float	0.0, 1.0
attribute	PropD	long_name	String	Propd
attribute	PropD	units	String	unitless
variable	Batch		int
attribute	Batch	actual_range	int	1, 2
attribute	Batch	long_name	String	Batch
attribute	Batch	units	String	unitless
variable	Date		String
attribute	Date	long_name	String	Date
attribute	Date	units	String	unitless
variable	Colony		int
attribute	Colony	actual_range	int	2, 100
attribute	Colony	long_name	String	Colony
attribute	Colony	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.