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ERDDAP > info > bcodmo_dataset_922101_v1

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     data   graph     files  public [HRR 18S full-length sequence BLAST results] - Results of 18S sequencing of full-length 18S
rDNA for metabarcoding samples collected during R/V Point Sur cruise PS18-09 in the Western
Gulf of Mexico in September 2017 (RAPID: Hurricane Impact on Phytoplankton Community Dynamics
and Metabolic Response)
   ?            M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_922101_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.922101.1
attribute NC_GLOBAL Easternmost_Easting double -94.9
attribute NC_GLOBAL geospatial_lon_max double -94.9
attribute NC_GLOBAL geospatial_lon_min double -96.9874
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/922101 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String This dataset includes results of 18S sequencing of full-length 18S rDNA for metabarcoding samples collected from surface depth at stations 06, 11, 16, 21, SS, and GI during R/V Pt. Sur cruise PS18-09 Leg 1 using Nanopore minION.
attribute NC_GLOBAL title String [HRR 18S full-length sequence BLAST results] - Results of 18S sequencing of full-length 18S rDNA for metabarcoding samples collected during R/V Point Sur cruise PS18-09 in the Western Gulf of Mexico in September 2017 (RAPID: Hurricane Impact on Phytoplankton Community Dynamics and Metabolic Response)
attribute NC_GLOBAL Westernmost_Easting double -96.9874
variable Station   String  
attribute Station long_name String Station
attribute Station units String unitless
variable Leg   int  
attribute Leg actual_range int 1, 1
attribute Leg long_name String Leg
attribute Leg units String unitless
variable Latitude   float  
attribute Latitude actual_range float 27.8358, 29.0649
attribute Latitude long_name String Latitude
attribute Latitude units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -96.9874, -94.9
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable Sequence_ID   String  
attribute Sequence_ID long_name String Sequence_id
attribute Sequence_ID units String unitless
variable Taxonomy   String  
attribute Taxonomy long_name String Taxonomy
attribute Taxonomy units String unitless
variable Similarity   float  
attribute Similarity actual_range float 90.0, 99.887
attribute Similarity long_name String Similarity
attribute Similarity units String percent
variable length   int  
attribute length actual_range int 1000, 2623
attribute length long_name String Length
attribute length units String base pairs (bp)
variable mismatches   int  
attribute mismatches actual_range int 0, 160
attribute mismatches long_name String Mismatches
attribute mismatches units String base pairs (bp)
variable gaps   int  
attribute gaps actual_range int 0, 89
attribute gaps long_name String Gaps
attribute gaps units String unitless
variable Q_start   int  
attribute Q_start actual_range int 1, 94850
attribute Q_start long_name String Q_start
attribute Q_start units String base pairs (bp)
variable Q_end   int  
attribute Q_end actual_range int 977, 96601
attribute Q_end long_name String Q_end
attribute Q_end units String base pairs (bp)
variable R_start   int  
attribute R_start actual_range int 1, 4593
attribute R_start long_name String R_start
attribute R_start units String base pairs (bp)
variable R_end   int  
attribute R_end actual_range int 1, 4593
attribute R_end long_name String R_end
attribute R_end units String base pairs (bp)
variable e_value   float  
attribute e_value actual_range float 0.0, 0.0
attribute e_value long_name String E_value
attribute e_value units String unitless
variable score   int  
attribute score actual_range int 1245, 4191
attribute score long_name String Score
attribute score units String unitless
variable file_name_orig   String  
attribute file_name_orig long_name String File_name_orig
attribute file_name_orig units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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