BCO-DMO ERDDAP
Accessing BCO-DMO data
log in    
Brought to you by BCO-DMO    

ERDDAP > info > bcodmo_dataset_934772_v1

Grid
DAP
Data
Sub-
set
Table
DAP
Data
Make
A
Graph
W
M
S
Source
Data
Files
Acces-
sible
?
Title Sum-
mary
FGDC,
ISO,
Metadata
Back-
ground
Info
RSS E
mail
Institution Dataset ID
     data   graph     files  public [Whole genome sequence data for Pisaster ochraceus] - Whole genome sequence data for Pisaster
ochranceus samples collected from the Pacific coast of North America from July 2004 to May
2018 (Collaborative Proposal: Selection and Genetic Succession in the Intertidal -- Population
Genomics of Pisaster ochraceus During a Wasting Disease Outbreak and its Aftermath)
   ?   F   I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_934772_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.934772.1
attribute NC_GLOBAL Easternmost_Easting double -118.86
attribute NC_GLOBAL geospatial_lat_max double 57.075
attribute NC_GLOBAL geospatial_lat_min double 34.034
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -118.86
attribute NC_GLOBAL geospatial_lon_min double -135.372
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/934772 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 57.075
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 34.034
attribute NC_GLOBAL summary String This dataset includes collection and accession information for whole genome sequence (WGS) data from 65 Pisaster ochraceus (ochre sea star) collected across latitudes ranging from SE Alaska to southern California. The sequence data have been deposited into NCBI SRA archive under BioProject PRJNA1117092 and will be publicly available on 2025-08-01. These data are used to evaluate the population genomic diversity and divergence of spatially and environmentally separated populations of Pisaster ochraceus.
attribute NC_GLOBAL title String [Whole genome sequence data for Pisaster ochraceus] - Whole genome sequence data for Pisaster ochranceus samples collected from the Pacific coast of North America from July 2004 to May 2018 (Collaborative Proposal: Selection and Genetic Succession in the Intertidal -- Population Genomics of Pisaster ochraceus During a Wasting Disease Outbreak and its Aftermath)
attribute NC_GLOBAL Westernmost_Easting double -135.372
variable sample_name   String  
attribute sample_name long_name String Sample_name
attribute sample_name units String unitless
variable bioproject_accession   String  
attribute bioproject_accession long_name String Bioproject_accession
attribute bioproject_accession units String unitless
variable bioproject_ncbi   String  
attribute bioproject_ncbi long_name String Bioproject_ncbi
attribute bioproject_ncbi units String unitless
variable assay_type   String  
attribute assay_type long_name String Assay_type
attribute assay_type units String unitless
variable organism   String  
attribute organism long_name String Organism
attribute organism units String unitless
variable isolation_source   String  
attribute isolation_source long_name String Isolation_source
attribute isolation_source units String unitless
variable collection_date   String  
attribute collection_date long_name String Collection_date
attribute collection_date units String unitless
variable iso_collection_date   String  
attribute iso_collection_date long_name String Iso_collection_date
attribute iso_collection_date units String unitless
variable geo_loc_name   String  
attribute geo_loc_name long_name String Geo_loc_name
attribute geo_loc_name units String unitless
variable latitude   float  
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 34.034, 57.075
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -135.372, -118.86
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable tissue   String  
attribute tissue long_name String Tissue
attribute tissue units String unitless
variable biomaterial_provider   String  
attribute biomaterial_provider long_name String Biomaterial_provider
attribute biomaterial_provider units String unitless
variable collected_by   String  
attribute collected_by long_name String Collected_by
attribute collected_by units String unitless
variable host_tissue_sampled   String  
attribute host_tissue_sampled long_name String Host_tissue_sampled
attribute host_tissue_sampled units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
ERDDAP, Version 2.22
Disclaimers | Privacy Policy | Contact