ERDDAP > info > bcodmo_dataset_935908_v1

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data			files	public	[Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish] - Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish collected on the north shore of Mo’orea, French Polynesia, Oct 2020 (CAREER: Testing the effects of predator-derived feces on host symbiont acquisition and health)		M	background			BCO-DMO	bcodmo_dataset_935908_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.935908.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/935908
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	summary	String	Understanding how microbial communities in consumer feces may impact ecosystem health may improve conservation and restoration efforts. To test how microbial communities in fish feces may affect coral reef health, we collected fecal samples from ten fish species, ranging from obligate corallivore to grazer/detritivore. Additionally, samples of corals, algae, sediments, and seawater were collected to test whether bacterial taxa in these samples were also represented in fish feces (N = 5-14 per fish, coral, or algae species/genus). All collections were conducted in October 2020 from the back reef (1-2 m depth) and fore reef (5-10 m depth) in Moorea, between LTER sites 1 and 2 of the Moorea Coral Reef (MCR) Long Term Ecological Research (LTER) site. We conducted bacterial 16S rRNA gene metabarcoding on all samples and found that fecal communities of bacteria differed among fish guilds (obligate corallivores, facultative corallivores, grazer/detritivores). We also used real-time PCR to quantify abundances of Vibrio coralliilyticus, a known coral pathogen, in all fecal samples. Samples were collected and processed, and data were analyzed, by the authors of Grupstra et al., 2023.
attribute	NC_GLOBAL	title	String	[Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish] - Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish collected on the north shore of Mo’orea, French Polynesia, Oct 2020 (CAREER: Testing the effects of predator-derived feces on host symbiont acquisition and health)
variable	sample_name		String
attribute	sample_name	long_name	String	Sample_name
attribute	sample_name	units	String	unitless
variable	SRA		String
attribute	SRA	long_name	String	Sra
attribute	SRA	units	String	unitless
variable	BioSample		String
attribute	BioSample	long_name	String	Biosample
attribute	BioSample	units	String	unitless
variable	organism		String
attribute	organism	long_name	String	Organism
attribute	organism	units	String	unitless
variable	strain		String
attribute	strain	long_name	String	Strain
attribute	strain	units	String	unitless
variable	isolation_source		String
attribute	isolation_source	long_name	String	Isolation_source
attribute	isolation_source	units	String	unitless
variable	collection_date		String
attribute	collection_date	long_name	String	Collection_date
attribute	collection_date	units	String	unitless
variable	geo_loc_name		String
attribute	geo_loc_name	long_name	String	Geo_loc_name
attribute	geo_loc_name	units	String	unitless
variable	depth_r		String
attribute	depth_r	long_name	String	Depth
attribute	depth_r	units	String	m
variable	env_broad_scale		String
attribute	env_broad_scale	long_name	String	Env_broad_scale
attribute	env_broad_scale	units	String	unitless
variable	host_description		String
attribute	host_description	long_name	String	Host_description
attribute	host_description	units	String	unitless
variable	host_tissue_sampled		String
attribute	host_tissue_sampled	long_name	String	Host_tissue_sampled
attribute	host_tissue_sampled	units	String	unitless
variable	host_diet		String
attribute	host_diet	long_name	String	Host_diet
attribute	host_diet	units	String	unitless
variable	host_feces_dCT		float
attribute	host_feces_dCT	actual_range	float	8.23, 20.507
attribute	host_feces_dCT	long_name	String	Host_feces_dct
attribute	host_feces_dCT	units	String	cycles
variable	host_AphiaID		String
attribute	host_AphiaID	long_name	String	Host_aphiaid
attribute	host_AphiaID	units	String	unitless
variable	host_ScientificName		String
attribute	host_ScientificName	long_name	String	Host_scientificname
attribute	host_ScientificName	units	String	unitless
variable	host_LSID		String
attribute	host_LSID	long_name	String	Host_lsid
attribute	host_LSID	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.