bcodmo_dataset_949101_v1

Name: [Eukaryotic viruses encode the ribosomal protein eL40] - NCBI accession metadata for Eukaryotic viruses encoding ribosomal protein eL40 from samples collected on KM1419 and KM1108 from Mar 2011 to Sep 2014 (Giant viruses in the open ocean: Is large size adaptive where cells are scarce?)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Eukaryotic viruses encode the ribosomal protein eL40] - NCBI accession metadata for Eukaryotic viruses encoding ribosomal protein eL40 from samples collected on KM1419 and KM1108 from Mar 2011 to Sep 2014 (Giant viruses in the open ocean: Is large size adaptive where cells are scarce?)		F I M	background			BCO-DMO	bcodmo_dataset_949101_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.949101.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-158.0
attribute	NC_GLOBAL	geospatial_lat_max	double	22.75
attribute	NC_GLOBAL	geospatial_lat_min	double	22.45
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-158.0
attribute	NC_GLOBAL	geospatial_lon_min	double	-158.0
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/949101
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	22.75
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	22.45
attribute	NC_GLOBAL	summary	String	This dataset contains sample collection metadata, as well as GenBank accessions and relevant Bioproject numbers for FloV-SA2 samples collected on KM1419 and KM1108 at Station ALOHA from Mar 2011 to Sep 2014. This study analyzes the genome of FloV-SA2 (phylum Nucleocytoviricota), a cultured marine virus isolated from open ocean seawater in the Pacific Ocean using a marine microalga strain (UHM3020) in the genus Florenciella (class Dictyochophyceae) as a host. The analysis highlights unique features of the genome, including the encoding of a ribosomal protein (eL40) and a group II viral rhodopsin. The research explores the affiliations and possible origins of these genes, supported by metagenomic and metatranscriptomic data indicating the presence and expression of eL40 in other giant viruses. This study expands the understanding of the metabolic versatility of eukaryoviruses and proposes new mechanisms by which these viruses can manipulate host resources and energy.
attribute	NC_GLOBAL	title	String	[Eukaryotic viruses encode the ribosomal protein eL40] - NCBI accession metadata for Eukaryotic viruses encoding ribosomal protein eL40 from samples collected on KM1419 and KM1108 from Mar 2011 to Sep 2014 (Giant viruses in the open ocean: Is large size adaptive where cells are scarce?)
attribute	NC_GLOBAL	Westernmost_Easting	double	-158.0
variable	Taxa_name		String
attribute	Taxa_name	long_name	String	Taxa_name
attribute	Taxa_name	units	String	units
variable	Source_of_sample		String
attribute	Source_of_sample	long_name	String	Source_of_sample
attribute	Source_of_sample	units	String	units
variable	Genbank_accession		String
attribute	Genbank_accession	long_name	String	Genbank_accession
attribute	Genbank_accession	units	String	units
variable	Bioproject_number		String
attribute	Bioproject_number	long_name	String	Bioproject_number
attribute	Bioproject_number	units	String	units
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	22.45, 22.75
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-158.0, -158.0
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Date_Isolated		String
attribute	Date_Isolated	long_name	String	Date_isolated
attribute	Date_Isolated	units	String	units

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.