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     data        files  public [Trematode Parasite COI Sequences] - COI mtDNA sequences for trematodes from fish collections
across the Northern Line Islands and French Polynesia archipelagos collected between 2009 and
2023 (Collaborative Research: Decomposing the effects of diversity on the abundance of marine
parasites)
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.953401.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/953401 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String The loss of biological diversity is considered one of the principal environmental challenges of the 21st century, and there are hints that this massive reorganization of food webs could affect how parasites are transmitted among hosts. Parasites are often hidden and can be easy to overlook, but they are ecologically important and ubiquitous - so it is important to understand whether we should expect more or fewer of them as biodiversity disappears. Does biodiversity loss increase the abundance of parasites by eroding natural "checks and balances" on transmission? Or does it decrease parasite abundance by removing the free-living biodiversity on which parasites depend? Answers to these questions are urgently needed if we are to mitigate or prevent an uptick in parasite transmission for ecosystems experiencing biodiversity loss.

In a joint collaborative research project among the University of Washington, Scripps Institution of Oceanography at UC San Diego, and California State University Monterey Bay, we created a parasite dataset of unprecedented size and taxonomic resolution. We sampled parasites of coral reef fishes from 19 replicate islands in the central equatorial Pacific to study how biodiversity and parasite burden covary.

This data set contains COI mtDNA sequence accession numbers, collection locations, and life stages for trematodes from the family Microscaphidiidae and Paramphistomatidae from fish collections across the Northern Line Islands and French Polynesia archipelagos collected between 2009 and 2023. Specifically this data set represents 87 Microscaphidiidae samples from the Northern Line Islands and 132 Paramphistomatidae from French Polynesia.
attribute NC_GLOBAL title String [Trematode Parasite COI Sequences] - COI mtDNA sequences for trematodes from fish collections across the Northern Line Islands and French Polynesia archipelagos collected between 2009 and 2023 (Collaborative Research: Decomposing the effects of diversity on the abundance of marine parasites)
variable NCBI_Accession_Number   String  
attribute NCBI_Accession_Number long_name String Ncbi_accession_number
attribute NCBI_Accession_Number units String unitless
variable Collection_Location   String  
attribute Collection_Location long_name String Collection_location
attribute Collection_Location units String unitless
variable Larval_or_Adult   String  
attribute Larval_or_Adult long_name String Larval_or_adult
attribute Larval_or_Adult units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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