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     data   graph     files  public [RECHARGE 2018 - 2020 Microbiome Host Bleaching and Mortality Data] - Microbiome Host
Bleaching and Mortality Data for coral hosts collected in Moorea, French Polynesia from Jul
2018 to Aug 2020 (Collaborative Research: Tipping points in coral reefs and their associated
microbiomes: interactive effects of herbivory, nutrient enrichment, and temperature)
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.954197.1
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/954197 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String This dataset contains bleaching and mortality levels for the coral hosts associated with the 16S rRNA gene V4 region amplicon sequencing data, NCBI SRA accession from BioProject PRJNA994532. Orthorectified photomosaics were assembled from photos taken of experimental plots from an in situ coral manipulative experiment in Moorea, French Polynesia between 2018-2020. Partial bleaching and mortality was assigned from these photomosaics to Acropora retusa, Porites lobata, and Pocillopora spp. coral colonies associated with the microbiome sampling described above, whenever possible. Data collection was a multi-university collaborative effort between the Vega Thurber Laboratory, at Oregon State University during the time of the experiment, and the Burkepile Community Ecology Laboratory at UC Santa Barbara.

The experiment, conducted on the fore reef on the north shore of the island, evaluated the interaction of consumer pressure level (termed "Herbivory" in the dataset and in Vompe et al., 2023) and nutrient enrichment on coral microbiome composition and host bleaching and mortality. The experiment also captured two severe and sequential marine heatwaves in 2019 and 2020. This experiment aimed to evaluate whether managing local inputs, including water column nutrient levels and fishing regimes, interacts with heat stress to affect coral success. Coral colony partial bleaching and partial mortality data were collected for hosts sampled for microbiome analyses, because we aimed to correlate microbiome changes to changes in host phenotypes.
attribute NC_GLOBAL title String [RECHARGE 2018 - 2020 Microbiome Host Bleaching and Mortality Data] - Microbiome Host Bleaching and Mortality Data for coral hosts collected in Moorea, French Polynesia from Jul 2018 to Aug 2020 (Collaborative Research: Tipping points in coral reefs and their associated microbiomes: interactive effects of herbivory, nutrient enrichment, and temperature)
variable Sample   String  
attribute Sample long_name String Sample
attribute Sample units String unitless
variable Date   String  
attribute Date long_name String Date
attribute Date units String unitless
variable Coral   String  
attribute Coral long_name String Coral
attribute Coral units String unitless
variable Herbivory   String  
attribute Herbivory long_name String Herbivory
attribute Herbivory units String unitless
variable Nutrients   String  
attribute Nutrients long_name String Nutrients
attribute Nutrients units String unitless
variable Plot   String  
attribute Plot long_name String Plot
attribute Plot units String unitless
variable Tag   String  
attribute Tag long_name String Tag
attribute Tag units String unitless
variable Run   String  
attribute Run long_name String Run
attribute Run units String unitless
variable Colony   String  
attribute Colony long_name String Colony
attribute Colony units String unitless
variable percent_bleached   int  
attribute percent_bleached actual_range int 0, 95
attribute percent_bleached long_name String Percent_bleached
attribute percent_bleached units String percent
variable percent_dead   int  
attribute percent_dead actual_range int 0, 100
attribute percent_dead long_name String Percent_dead
attribute percent_dead units String percent

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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