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     data   graph     files  public [Zostera marina GenBank SRA accession numbers] - NCBI accession numbers and related metadata
for an SRA archive of the seagrass, Zostera marina (RUI: Collaborative Research: Trait
differentiation and local adaptation to depth within meadows of the foundation seagrass
Zostera marina)
   ?   F   I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_958698_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.958698.1
attribute NC_GLOBAL Easternmost_Easting double -70.65518
attribute NC_GLOBAL geospatial_lat_max double 42.59676
attribute NC_GLOBAL geospatial_lat_min double 42.41902
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -70.65518
attribute NC_GLOBAL geospatial_lon_min double -70.91759
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/958698 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 42.59676
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 42.41902
attribute NC_GLOBAL summary String Using recent advances in indirect genetic methods applied to both adult plants and dispersed seeds, we find that the mean seed dispersal in a threatened marine foundation plant (the seagrass Zostera marina) is approximately 100-200 meters. We documented strong phenotypic variation and genome-wide differentiation among plants separated by less than the spatial scale of mean realized dispersal, which suggests genetic isolation by environment in response to depth-related environmental gradients. Within all meadows, the ratio of effective to census size (or Ne/Nc) approximated 0.1%, indicating that a fraction of existing plants provides the genetic variation to allow adaptation to environmental change. The SRA dataset at NCBI contains the raw sequencing reads that were used to create genotypes and genotype likelihoods.
attribute NC_GLOBAL title String [Zostera marina GenBank SRA accession numbers] - NCBI accession numbers and related metadata for an SRA archive of the seagrass, Zostera marina (RUI: Collaborative Research: Trait differentiation and local adaptation to depth within meadows of the foundation seagrass Zostera marina)
attribute NC_GLOBAL Westernmost_Easting double -70.91759
variable Accession   String  
attribute Accession long_name String Accession
attribute Accession units String unitless
variable Sample_Name   String  
attribute Sample_Name long_name String Sample_name
attribute Sample_Name units String unitless
variable adult_seed   String  
attribute adult_seed long_name String Adult_seed
attribute adult_seed units String unitless
variable site   String  
attribute site long_name String Site
attribute site units String unitless
variable SvD   String  
attribute SvD long_name String Svd
attribute SvD units String unitless
variable quad_name   String  
attribute quad_name long_name String Quad_name
attribute quad_name units String unitless
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -70.91759, -70.65518
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable latitude   float  
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 42.41902, 42.59676
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable YearCollected   String  
attribute YearCollected long_name String Yearcollected
attribute YearCollected units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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