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     data   graph     files  public [16S rRNA amplicon sequence metadata from water samples and biofilms] - 16S rRNA gene
amplicon sequences metadata collected from water samples and biofilms on mineral substrates
deployed in the Lau Basin (Tonga) during R/V Thompson cruise TN401 from Mar to Apr 2022 (RUI:
Collaborative Research: The impact of symbiont-larval interactions on species distributions
across southwestern Pacific hydrothermal vents)
   ?   F   I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_964227_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.964227.1
attribute NC_GLOBAL Easternmost_Easting double -71.48
attribute NC_GLOBAL geospatial_lat_max double 41.39
attribute NC_GLOBAL geospatial_lat_min double -21.99
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -71.48
attribute NC_GLOBAL geospatial_lon_min double -176.57
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 2725.0
attribute NC_GLOBAL geospatial_vertical_min double 1877.0
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/964227 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 41.39
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double -21.99
attribute NC_GLOBAL summary String 16S rRNA gene amplicon sequences were generated from biofilms present on crushed substrates deployed at Lau Basin hydrothermal vents for approximately two weeks during R/V Thompson cruise TN401 from March to April 2022, typically in diffuse fluid flow. 16S rRNA gene amplicon sequences were generated from seawater or hydrothermal fluid samples collected on to filters via ROV deployed instruments. This dataset contains NCBI accession metadata and sample collection information.
attribute NC_GLOBAL title String [16S rRNA amplicon sequence metadata from water samples and biofilms] - 16S rRNA gene amplicon sequences metadata collected from water samples and biofilms on mineral substrates deployed in the Lau Basin (Tonga) during R/V Thompson cruise TN401 from Mar to Apr 2022 (RUI: Collaborative Research: The impact of symbiont-larval interactions on species distributions across southwestern Pacific hydrothermal vents)
attribute NC_GLOBAL Westernmost_Easting double -176.57
variable Sample_ID   String  
attribute Sample_ID long_name String Sample_id
attribute Sample_ID units String unitless
variable Bioproject_accession   String  
attribute Bioproject_accession long_name String Bioproject_accession
attribute Bioproject_accession units String unitless
variable Biosample_accession   String  
attribute Biosample_accession long_name String Biosample_accession
attribute Biosample_accession units String unitless
variable Collection_date   String  
attribute Collection_date long_name String Collection_date
attribute Collection_date units String unitless
variable latitude   float  
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float -21.99, 41.39
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -176.57, -71.48
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable depth   int  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth actual_range int 1877, 2725
attribute depth axis String Z
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable Sample_type   String  
attribute Sample_type long_name String Sample_type
attribute Sample_type units String unitless
variable Colonizer_No   int  
attribute Colonizer_No actual_range int 1, 15
attribute Colonizer_No long_name String Colonizer_no
attribute Colonizer_No units String unitless
variable SRA_Study   String  
attribute SRA_Study long_name String Sra_study
attribute SRA_Study units String unitless
variable SRA_accession   String  
attribute SRA_accession long_name String Sra_accession
attribute SRA_accession units String unitless
variable Sequencing_technologies   String  
attribute Sequencing_technologies long_name String Sequencing_technologies
attribute Sequencing_technologies units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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