Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Grid DAP Data | Sub- set | Table DAP Data | Make A Graph | W M S | Source Data Files | Acces- sible 
| Title | Sum- mary | FGDC, ISO, Metadata | Back- ground Info | RSS | E | Institution | Dataset ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| data | graph | files | public | [Metagenomic sequence metadata] - NCBI Metagenomic metadata for Lau Basin (Tonga) mollusc gill tissue collected on R/V Thompson cruises TN235 and TN401 and R/V Falkor cruise FK160407 between May 2009 and Apr 2022 (RUI: Collaborative Research: The impact of symbiont-larval interactions on species distributions across southwestern Pacific hydrothermal vents) |
| F I M | background
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| BCO-DMO | bcodmo_dataset_964236_v1 |
| Row Type | Variable Name | Attribute Name | Data Type | Value |
|---|---|---|---|---|
| attribute | NC_GLOBAL | cdm_data_type | String | Other |
| attribute | NC_GLOBAL | Conventions | String | COARDS, CF-1.6, ACDD-1.3 |
| attribute | NC_GLOBAL | creator_email | String | info at bco-dmo.org |
| attribute | NC_GLOBAL | creator_name | String | BCO-DMO |
| attribute | NC_GLOBAL | creator_url | String | https://www.bco-dmo.org/ |
| attribute | NC_GLOBAL | doi | String | 10.26008/1912/bco-dmo.964236.1 |
| attribute | NC_GLOBAL | Easternmost_Easting | double | -173.79 |
| attribute | NC_GLOBAL | geospatial_lat_max | double | -15.0 |
| attribute | NC_GLOBAL | geospatial_lat_min | double | -22.18 |
| attribute | NC_GLOBAL | geospatial_lat_units | String | degrees_north |
| attribute | NC_GLOBAL | geospatial_lon_max | double | -173.79 |
| attribute | NC_GLOBAL | geospatial_lon_min | double | -176.6 |
| attribute | NC_GLOBAL | geospatial_lon_units | String | degrees_east |
| attribute | NC_GLOBAL | geospatial_vertical_max | double | 2718.0 |
| attribute | NC_GLOBAL | geospatial_vertical_min | double | 1816.0 |
| attribute | NC_GLOBAL | geospatial_vertical_positive | String | down |
| attribute | NC_GLOBAL | geospatial_vertical_units | String | m |
| attribute | NC_GLOBAL | infoUrl | String | https://osprey.bco-dmo.org/dataset/964236 |
| attribute | NC_GLOBAL | institution | String | BCO-DMO |
| attribute | NC_GLOBAL | license | String | The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information. |
| attribute | NC_GLOBAL | Northernmost_Northing | double | -15.0 |
| attribute | NC_GLOBAL | sourceUrl | String | (local files) |
| attribute | NC_GLOBAL | Southernmost_Northing | double | -22.18 |
| attribute | NC_GLOBAL | summary | String | Metagenomic sequence data from Lau Basin hydrothermal vent mollusc gill tissues that contain chemosynthetic bacterial symbionts. Samples were collected between May 2009 to April 2022 aboard R/V Thompson cruises TN235 (May-June 2009) and TN401 (April 2016) and R/V Falkor cruise FK160407 (April 2022) for population and comparative genomics analysis of host animal and bacterial symbionts. |
| attribute | NC_GLOBAL | title | String | [Metagenomic sequence metadata] - NCBI Metagenomic metadata for Lau Basin (Tonga) mollusc gill tissue collected on R/V Thompson cruises TN235 and TN401 and R/V Falkor cruise FK160407 between May 2009 and Apr 2022 (RUI: Collaborative Research: The impact of symbiont-larval interactions on species distributions across southwestern Pacific hydrothermal vents) |
| attribute | NC_GLOBAL | Westernmost_Easting | double | -176.6 |
| variable | Sample_ID | String | ||
| attribute | Sample_ID | long_name | String | Sample_id |
| attribute | Sample_ID | units | String | unitless |
| variable | Bioproject_accession | String | ||
| attribute | Bioproject_accession | long_name | String | Bioproject_accession |
| attribute | Bioproject_accession | units | String | unitless |
| variable | Biosample_accession | String | ||
| attribute | Biosample_accession | long_name | String | Biosample_accession |
| attribute | Biosample_accession | units | String | unitless |
| variable | Host_species | String | ||
| attribute | Host_species | long_name | String | Host_species |
| attribute | Host_species | units | String | unitless |
| variable | Tissue_type | String | ||
| attribute | Tissue_type | long_name | String | Tissue_type |
| attribute | Tissue_type | units | String | unitless |
| variable | latitude | float | ||
| attribute | latitude | _CoordinateAxisType | String | Lat |
| attribute | latitude | actual_range | float | -22.18, -15.0 |
| attribute | latitude | axis | String | Y |
| attribute | latitude | ioos_category | String | Location |
| attribute | latitude | long_name | String | Latitude |
| attribute | latitude | standard_name | String | latitude |
| attribute | latitude | units | String | degrees_north |
| variable | longitude | float | ||
| attribute | longitude | _CoordinateAxisType | String | Lon |
| attribute | longitude | actual_range | float | -176.6, -173.79 |
| attribute | longitude | axis | String | X |
| attribute | longitude | ioos_category | String | Location |
| attribute | longitude | long_name | String | Longitude |
| attribute | longitude | standard_name | String | longitude |
| attribute | longitude | units | String | degrees_east |
| variable | Collection_date | String | ||
| attribute | Collection_date | long_name | String | Collection_date |
| attribute | Collection_date | units | String | unitless |
| variable | Cruise | String | ||
| attribute | Cruise | long_name | String | Cruise |
| attribute | Cruise | units | String | unitless |
| variable | depth | float | ||
| attribute | depth | _CoordinateAxisType | String | Height |
| attribute | depth | _CoordinateZisPositive | String | down |
| attribute | depth | actual_range | float | 1816.0, 2718.0 |
| attribute | depth | axis | String | Z |
| attribute | depth | ioos_category | String | Location |
| attribute | depth | long_name | String | Depth |
| attribute | depth | positive | String | down |
| attribute | depth | standard_name | String | depth |
| attribute | depth | units | String | m |
| variable | MAG_biosample_accession | String | ||
| attribute | MAG_biosample_accession | long_name | String | Mag_biosample_accession |
| attribute | MAG_biosample_accession | units | String | unitless |
| variable | Sequencing_technologies | String | ||
| attribute | Sequencing_technologies | long_name | String | Sequencing_technologies |
| attribute | Sequencing_technologies | units | String | unitless |
| variable | SRA_Study | String | ||
| attribute | SRA_Study | long_name | String | Sra_study |
| attribute | SRA_Study | units | String | unitless |
| variable | SRA_accession | String | ||
| attribute | SRA_accession | long_name | String | Sra_accession |
| attribute | SRA_accession | units | String | unitless |
| variable | Assembly_methods | String | ||
| attribute | Assembly_methods | long_name | String | Assembly_methods |
| attribute | Assembly_methods | units | String | unitless |
| variable | Symbiont_MAG_ID | String | ||
| attribute | Symbiont_MAG_ID | long_name | String | Symbiont_mag_id |
| attribute | Symbiont_MAG_ID | units | String | unitless |
| variable | MAG_acc | String | ||
| attribute | MAG_acc | long_name | String | Mag_acc |
| attribute | MAG_acc | units | String | unitless |
| variable | MAG_organism | String | ||
| attribute | MAG_organism | long_name | String | Mag_organism |
| attribute | MAG_organism | units | String | unitless |
| variable | Host_AphiaID_accepted | String | ||
| attribute | Host_AphiaID_accepted | long_name | String | Host_aphiaid_accepted |
| attribute | Host_AphiaID_accepted | units | String | unitless |
| variable | Host_LSID | String | ||
| attribute | Host_LSID | long_name | String | Host_lsid |
| attribute | Host_LSID | units | String | unitless |
The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.