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     data   graph     files  public [Microbial diversity survey Axial Seamount 2023] - Metabarcoding data from microbial
diversity survey at Axial Seamount aboard the R/V Thompson cruise TN420 in Jul 2022 and Jul
2023 (Characterizing and quantifying the impact of phagotrophic protists at hot spots of
primary production at Axial Seamount)
   ?   F   I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_969102_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.969102.1
attribute NC_GLOBAL Easternmost_Easting double -129.9791
attribute NC_GLOBAL geospatial_lat_max double 45.93359
attribute NC_GLOBAL geospatial_lat_min double 45.91623
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -129.9791
attribute NC_GLOBAL geospatial_lon_min double -130.0495
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 1540.0
attribute NC_GLOBAL geospatial_vertical_min double 0.0
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/969102 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 45.93359
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 45.91623
attribute NC_GLOBAL summary String Microorganisms are the ancestral forms of life on our planet and have been instrumental in shaping all of Earth?s environments into what they are today. In the ocean, microbial prokaryotes and eukaryotes form the foundation of marine food webs through their activity and interactions. Single-celled microbial eukaryotes (or protists) are some of the most important species on the planet, yet our understanding of how their activities influence and regulate the ocean ecosystem is poorly constrained. At deep-sea hydrothermal vents in particular, our understanding of microbial food web dynamics is incomplete without including the role of microbial eukaryotes. In July 2023, we completed an ROV expedition to Axial Seamount (NE Pacific), where we used ROV Jason to collect low temperature diffuse vent fluid and surrounding plume and background seawater. These samples were filtered in situ or shipboard to collect the microbial communities. Data provided are the product of amplicon tag-sequencing using both 18S rRNA and 16S rRNA gene primers.
attribute NC_GLOBAL title String [Microbial diversity survey Axial Seamount 2023] - Metabarcoding data from microbial diversity survey at Axial Seamount aboard the R/V Thompson cruise TN420 in Jul 2022 and Jul 2023 (Characterizing and quantifying the impact of phagotrophic protists at hot spots of primary production at Axial Seamount)
attribute NC_GLOBAL Westernmost_Easting double -130.0495
variable Accession   String  
attribute Accession long_name String Accession
attribute Accession units String unitless
variable Sample_Name   String  
attribute Sample_Name long_name String Sample_name
attribute Sample_Name units String unitless
variable NCBI_Organism_Name   String  
attribute NCBI_Organism_Name long_name String Ncbi_organism_name
attribute NCBI_Organism_Name units String unitless
variable NCBI_Tax_ID   String  
attribute NCBI_Tax_ID long_name String Ncbi_tax_id
attribute NCBI_Tax_ID units String unitless
variable BioProject   String  
attribute BioProject long_name String Bioproject
attribute BioProject units String unitless
variable dive_ctd   String  
attribute dive_ctd long_name String Dive_ctd
attribute dive_ctd units String unitless
variable site_name   String  
attribute site_name long_name String Site_name
attribute site_name units String unitless
variable collection_method   String  
attribute collection_method long_name String Collection_method
attribute collection_method units String unitless
variable sample_type   String  
attribute sample_type long_name String Sample_type
attribute sample_type units String unitless
variable filter   String  
attribute filter long_name String Filter
attribute filter units String unitless
variable processing   String  
attribute processing long_name String Processing
attribute processing units String unitless
variable primer   String  
attribute primer long_name String Primer
attribute primer units String unitless
variable target_population   String  
attribute target_population long_name String Target_population
attribute target_population units String unitless
variable location_name   String  
attribute location_name long_name String Location_name
attribute location_name units String unitless
variable depth_category   String  
attribute depth_category long_name String Depth_category
attribute depth_category units String unitless
variable depth   int  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth actual_range int 0, 1540
attribute depth axis String Z
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable fluid_origin   String  
attribute fluid_origin long_name String Fluid_origin
attribute fluid_origin units String unitless
variable AXIAL_YEAR   String  
attribute AXIAL_YEAR long_name String Axial_year
attribute AXIAL_YEAR units String unitless
variable latitude   float  
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 45.91623, 45.93359
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -130.0495, -129.9791
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Long
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable DATE   String  
attribute DATE long_name String Date
attribute DATE units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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