ERDDAP > info > bcodmo_dataset_986592_v1

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Longitudinal study NCBI SRA] - NCBI Sequence Read Archive (SRA) accession numbers for fastq sequence files of 16S amplicons from a longitudinal study of SCTLD at St. John, U.S. Virgin Islands from 2020 to 2024 (A multi-scale approach to predicting infectious multi-host disease spread in marine benthic communities)		F   I   M	background			BCO-DMO	bcodmo_dataset_986592_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.986592.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-64.70402
attribute	NC_GLOBAL	geospatial_lat_max	double	18.33797
attribute	NC_GLOBAL	geospatial_lat_min	double	18.31462
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-64.70402
attribute	NC_GLOBAL	geospatial_lon_min	double	-64.7642
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://osprey.bco-dmo.org/dataset/986592
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	18.33797
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	18.31462
attribute	NC_GLOBAL	summary	String	In St. John, U.S. Virgin Islands, a longitudinal study of Colpophyllia natans was conducted. Six corals per site (two sites) were tagged and repeatedly sampled from July 2020 through March 2024, during which time, stony coral tissue loss disease (SCTLD) arrived on the reefs. As the tagged corals contracted SCTLD, coral tissue and near-coral seawater (2-5 centimeters from colony surface) were collected. Coral tissue was separated from the coral skeleton, and the seawater was filtered through 0.2-micrometer (µm) filters. DNA was extracted from the tissue and filters, and 16S ribosomal RNA gene sequencing was done to determine the bacteria and archaea communities that live within and near the corals. The goal of the study was to determine how coral-associated microbiomes are affected by the arrival of SCTLD through time. This data set contains the fastq files of the 16S amplicon sequencing of the coral tissue and near-coral seawater communities. National Center for Biotechnology Information (NCBI) SRA: SRP550314; BioProject: PRJNA1194595
attribute	NC_GLOBAL	title	String	[Longitudinal study NCBI SRA] - NCBI Sequence Read Archive (SRA) accession numbers for fastq sequence files of 16S amplicons from a longitudinal study of SCTLD at St. John, U.S. Virgin Islands from 2020 to 2024 (A multi-scale approach to predicting infectious multi-host disease spread in marine benthic communities)
attribute	NC_GLOBAL	Westernmost_Easting	double	-64.7642
variable	Experiment_Accession		String
attribute	Experiment_Accession	long_name	String	Experiment_accession
attribute	Experiment_Accession	units	String	unitless
variable	Instrument		String
attribute	Instrument	long_name	String	Instrument
attribute	Instrument	units	String	unitless
variable	Study_Accession		String
attribute	Study_Accession	long_name	String	Study_accession
attribute	Study_Accession	units	String	unitless
variable	Study_Title		String
attribute	Study_Title	long_name	String	Study_title
attribute	Study_Title	units	String	unitless
variable	Sample_Accession		String
attribute	Sample_Accession	long_name	String	Sample_accession
attribute	Sample_Accession	units	String	unitless
variable	Library_Name		String
attribute	Library_Name	long_name	String	Library_name
attribute	Library_Name	units	String	unitless
variable	Collection_date		String
attribute	Collection_date	long_name	String	Collection_date
attribute	Collection_date	units	String	unitless
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	18.31462, 18.33797
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-64.7642, -64.70402
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.