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     data   graph     files  public [Mesopelagic decay experiments: Biochemical percentages] - Biochemical percentages (protein,
polysaccharides, and lipids) from mesopelagic decay experiments with Thalassiosira
weissflogii, Emiliania huxleyii, and Tetraselmis sp. (Collaborative Research: Transforming
Carbon in the Deep Sea)
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.995521.1
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/995521 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL summary String The mesopelagic zone is a site of strong microbially driven particle attenuation with depth and thus plays a crucial role in controlling the transfer efficiency of the ocean's biological pump. However, little quantitative information exists on the dependency of decay processes on the source material. Here, we followed the decay of 14C-labeled dead particulate carbon (POC) and dissolved organic carbon (DOC) from three different phytoplankton species, and two incubations of live diatoms, in mesopelagic water over three months. Commonly used first-order kinetics failed to adequately describe the decay of organic material as rate constants varied from day to day. Over extended periods, decay rates for organic material exhibited two distinct phases, with rates in the second phase being inversely related to rates in the first phase. Microbial biomass (measured via ATP and cell counts) increased substantially during phase 1 and ebbed during phase 2. Decay rates were significantly different among the three algal sources; however, differences were even more pronounced among carbon pools and followed a distinct pattern (combined average per-day decay rates at 12 degrees Celsius): fresh DOC (0.6) > fresh POC (0.1) > live cells (0.06) > aged DOC/POC (0.01). Separation of POC into four broad biochemical fractions showed that components in the operationally defined lipid fraction contained the most degradable compounds for fresh material. Our research highlights the need to include the dynamics of the most easily digestible fractions of freshly released organic material, and live plankton resilient to digestion, in calculations of vertical carbon flux budgets.

This dataset contains measurements of the percentage of 14C remaining over time in three biochemical fractions (protein, polysaccharides, and lipids) derived from particulate organic carbon (POC) in mesopelagic decay experiments using three different 14C-labeled algae (Thalassiosira weissflogii, Tetraselmis sp., and Emiliania huxleyi). See the "Related Datasets" section for complementary datasets from the same experiments.
attribute NC_GLOBAL title String [Mesopelagic decay experiments: Biochemical percentages] - Biochemical percentages (protein, polysaccharides, and lipids) from mesopelagic decay experiments with Thalassiosira weissflogii, Emiliania huxleyii, and Tetraselmis sp. (Collaborative Research: Transforming Carbon in the Deep Sea)
variable Experiment   int  
attribute Experiment actual_range int 2, 3
attribute Experiment long_name String Experiment
attribute Experiment units String unitless
variable Algal_substrate   String  
attribute Algal_substrate long_name String Algal_substrate
attribute Algal_substrate units String unitless
variable Carbon_pool   String  
attribute Carbon_pool long_name String Carbon_pool
attribute Carbon_pool units String unitless
variable Elapsed_days   int  
attribute Elapsed_days actual_range int 0, 87
attribute Elapsed_days long_name String Elapsed_days
attribute Elapsed_days units String days
variable Pcnt_Protein_flask1   float  
attribute Pcnt_Protein_flask1 actual_range float 54.38, 84.55
attribute Pcnt_Protein_flask1 long_name String Pcnt_protein_flask1
attribute Pcnt_Protein_flask1 units String percent (%)
variable Pcnt_Protein_flask2   float  
attribute Pcnt_Protein_flask2 actual_range float 49.69, 87.4
attribute Pcnt_Protein_flask2 long_name String Pcnt_protein_flask2
attribute Pcnt_Protein_flask2 units String percent (%)
variable Pcnt_Protein_flask3   float  
attribute Pcnt_Protein_flask3 actual_range float 47.51, 82.45
attribute Pcnt_Protein_flask3 long_name String Pcnt_protein_flask3
attribute Pcnt_Protein_flask3 units String percent (%)
variable Pcnt_Lipids_flask1   float  
attribute Pcnt_Lipids_flask1 actual_range float 4.55, 22.93
attribute Pcnt_Lipids_flask1 long_name String Pcnt_lipids_flask1
attribute Pcnt_Lipids_flask1 units String percent (%)
variable Pcnt_Lipids_flask2   float  
attribute Pcnt_Lipids_flask2 actual_range float 3.87, 30.78
attribute Pcnt_Lipids_flask2 long_name String Pcnt_lipids_flask2
attribute Pcnt_Lipids_flask2 units String percent (%)
variable Pcnt_Lipids_flask3   float  
attribute Pcnt_Lipids_flask3 actual_range float 4.92, 27.27
attribute Pcnt_Lipids_flask3 long_name String Pcnt_lipids_flask3
attribute Pcnt_Lipids_flask3 units String percent (%)
variable Pcnt_Poly_NA_flask1   float  
attribute Pcnt_Poly_NA_flask1 actual_range float 4.91, 33.15
attribute Pcnt_Poly_NA_flask1 long_name String Pcnt_poly_na_flask1
attribute Pcnt_Poly_NA_flask1 units String percent (%)
variable Pcnt_Poly_NA_flask2   float  
attribute Pcnt_Poly_NA_flask2 actual_range float 4.63, 31.88
attribute Pcnt_Poly_NA_flask2 long_name String Pcnt_poly_na_flask2
attribute Pcnt_Poly_NA_flask2 units String percent (%)
variable Pcnt_Poly_NA_flask3   float  
attribute Pcnt_Poly_NA_flask3 actual_range float 7.4, 40.71
attribute Pcnt_Poly_NA_flask3 long_name String Pcnt_poly_na_flask3
attribute Pcnt_Poly_NA_flask3 units String percent (%)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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