bcodmo_dataset_996942_v1

Name: [Cryptic Porites lineage genomic and microbiome data] - Host genome and microbiome sequencing data for Porites cryptic lineages in classic and extreme reefs in Palau in November 2021 (Collaborative Research: How do selection, plasticity, and dispersal interact to determine coral success in warmer and more variable environments?)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Cryptic Porites lineage genomic and microbiome data] - Host genome and microbiome sequencing data for Porites cryptic lineages in classic and extreme reefs in Palau in November 2021 (Collaborative Research: How do selection, plasticity, and dispersal interact to determine coral success in warmer and more variable environments?)		F I M	background			BCO-DMO	bcodmo_dataset_996942_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.996942.1
attribute	NC_GLOBAL	Easternmost_Easting	double	134.4766
attribute	NC_GLOBAL	geospatial_lat_max	double	7.36722
attribute	NC_GLOBAL	geospatial_lat_min	double	7.16162
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	134.4766
attribute	NC_GLOBAL	geospatial_lon_min	double	134.347
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://osprey.bco-dmo.org/dataset/996942
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	7.36722
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	7.16162
attribute	NC_GLOBAL	summary	String	This dataset contains host genomic and associated microbiome sequence data generated to investigate patterns of cryptic lineage structure, symbiotic diversity, and microbial community composition in reef-building corals (Porites spp.) across environmental gradients. Samples were collected from three classic (typical temperatures) and three extreme (higher temperatures and light attenuation) reef sites in Palau, and processed using high-throughput sequencing approaches to characterize (1) host population genomic variation and (2) taxonomic diversity of coral-associated microbial communities (Symbiodiniaceae and bacteria). Host genomic data were generated using a 2bRAD approach and analyzed to resolve lineage differentiation. Microbiome communities were characterized through amplicon sequencing, enabling assessment of microbial assemblages associated with distinct host lineages and environmental conditions.
attribute	NC_GLOBAL	title	String	[Cryptic Porites lineage genomic and microbiome data] - Host genome and microbiome sequencing data for Porites cryptic lineages in classic and extreme reefs in Palau in November 2021 (Collaborative Research: How do selection, plasticity, and dispersal interact to determine coral success in warmer and more variable environments?)
attribute	NC_GLOBAL	Westernmost_Easting	double	134.347
variable	Library_Name		String
attribute	Library_Name	long_name	String	Library_name
attribute	Library_Name	units	String	unitless
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	7.16162, 7.36722
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	134.347, 134.4766
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Date		String
attribute	Date	long_name	String	Date
attribute	Date	units	String	unitless
variable	Study_Accession		String
attribute	Study_Accession	long_name	String	Study_accession
attribute	Study_Accession	units	String	unitless
variable	Host_genetic_dataset_accession		String
attribute	Host_genetic_dataset_accession	long_name	String	Host_genetic_dataset_accession
attribute	Host_genetic_dataset_accession	units	String	unitless
variable	Experiment_Accession		String
attribute	Experiment_Accession	long_name	String	Experiment_accession
attribute	Experiment_Accession	units	String	unitless
variable	Library_accession_2BRAD		String
attribute	Library_accession_2BRAD	long_name	String	Library_accession_2brad
attribute	Library_accession_2BRAD	units	String	unitless
variable	Microbial_community_data_accession		String
attribute	Microbial_community_data_accession	long_name	String	Microbial_community_data_accession
attribute	Microbial_community_data_accession	units	String	unitless
variable	ITS2_library_biosample		String
attribute	ITS2_library_biosample	long_name	String	Its2_library_biosample
attribute	ITS2_library_biosample	units	String	unitless
variable	ITS2_Forward		String
attribute	ITS2_Forward	long_name	String	Its2_forward
attribute	ITS2_Forward	units	String	unitless
variable	ITS2_Reverse		String
attribute	ITS2_Reverse	long_name	String	Its2_reverse
attribute	ITS2_Reverse	units	String	unitless
variable	Library_biosample_16S		String
attribute	Library_biosample_16S	long_name	String	Library_biosample_16s
attribute	Library_biosample_16S	units	String	unitless
variable	Forward_16S		String
attribute	Forward_16S	long_name	String	Forward_16s
attribute	Forward_16S	units	String	unitless
variable	Reverse_16S		String
attribute	Reverse_16S	long_name	String	Reverse_16s
attribute	Reverse_16S	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.