bcodmo_dataset_998972_v1

Name: [Ampithoe valida population genetics] - Population genomics (RADseq-derived SNP genotypes) of the amphipod Ampithoe valida from collections in Japan, North America, and South America in 2015 (Detecting genetic adaptation during marine invasions)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Ampithoe valida population genetics] - Population genomics (RADseq-derived SNP genotypes) of the amphipod Ampithoe valida from collections in Japan, North America, and South America in 2015 (Detecting genetic adaptation during marine invasions)		F I M	background			BCO-DMO	bcodmo_dataset_998972_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.998972.1
attribute	NC_GLOBAL	Easternmost_Easting	double	142.5
attribute	NC_GLOBAL	geospatial_lat_max	double	46.66667
attribute	NC_GLOBAL	geospatial_lat_min	double	-43.37
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	142.5
attribute	NC_GLOBAL	geospatial_lon_min	double	-124.2167
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://osprey.bco-dmo.org/dataset/998972
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	46.66667
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	-43.37
attribute	NC_GLOBAL	summary	String	We clarified the cryptic diversity and introduction history of the marine amphipod Ampithoe valida by genotyping 10,295 single-nucleotide polymorphisms (SNPs) for 349 individuals from Japan, North America and Argentina. This dataset includes metadata, methods, genetic accession identifiers, and links to published code and processed data used to generate figures for the results publication Harper et al. (2022, doi:10.1007/s10592-022-01452-8) titled "Global distribution of cryptic native, introduced and hybrid lineages in the widespread estuarine amphipod Ampithoe valida." Raw FASTQ files were contributed to the National Center for Biotechnology Information (NCBI)'s Sequence Read Archive (SRA) and are available under BioProject PRJNA825556.
attribute	NC_GLOBAL	title	String	[Ampithoe valida population genetics] - Population genomics (RADseq-derived SNP genotypes) of the amphipod Ampithoe valida from collections in Japan, North America, and South America in 2015 (Detecting genetic adaptation during marine invasions)
attribute	NC_GLOBAL	Westernmost_Easting	double	-124.2167
variable	BioProject		String
attribute	BioProject	long_name	String	Bioproject
attribute	BioProject	units	String	unitless
variable	BioSample		String
attribute	BioSample	long_name	String	Biosample
attribute	BioSample	units	String	unitless
variable	sample_name		String
attribute	sample_name	long_name	String	Sample_name
attribute	sample_name	units	String	unitless
variable	strain		String
attribute	strain	long_name	String	Strain
attribute	strain	units	String	unitless
variable	isolate		String
attribute	isolate	long_name	String	Isolate
attribute	isolate	units	String	unitless
variable	collection_date		String
attribute	collection_date	long_name	String	Collection_date
attribute	collection_date	units	String	unitless
variable	geo_loc_name		String
attribute	geo_loc_name	long_name	String	Geo_loc_name
attribute	geo_loc_name	units	String	unitless
variable	Accession		String
attribute	Accession	long_name	String	Accession
attribute	Accession	units	String	unitless
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	-43.37, 46.66667
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-124.2167, 142.5
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.