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     data   graph     files  public [SAG AT50-08 Data] - Genomic data collected from R/V Atlantis cruise AT50-08 in the Eastern
Tropical North Pacific during February-March 2023 (Collaborative Research: Key Microbial
Processes in Oxygen Minimum Zones: From In Situ Community Rate Measurements to Single Cells)
   ?   F   I   M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_999321_v1

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.999321.1
attribute NC_GLOBAL Easternmost_Easting double -104.9
attribute NC_GLOBAL geospatial_lat_max double 18.8833
attribute NC_GLOBAL geospatial_lat_min double 18.1667
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -104.9
attribute NC_GLOBAL geospatial_lon_min double -106.2833
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 1000.0
attribute NC_GLOBAL geospatial_vertical_min double 40.0
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://osprey.bco-dmo.org/dataset/999321 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL Northernmost_Northing double 18.8833
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 18.1667
attribute NC_GLOBAL summary String This dataset corresponds to the raw sequences of the single-cell amplified genomes (SAGs) collected for the MicroPro project in the Eastern Tropical North Pacific oxygen minimum zone in February and March of 2023 aboard R/V Atlantis on cruise AT50-08B. It includes genome identifiers and associated metadata (e.g., sample IDs, collection context) and links each genome to its corresponding accession in the National Center for Biotechnology Information's Short Read Archive (NCBI SRA).
attribute NC_GLOBAL title String [SAG AT50-08 Data] - Genomic data collected from R/V Atlantis cruise AT50-08 in the Eastern Tropical North Pacific during February-March 2023 (Collaborative Research: Key Microbial Processes in Oxygen Minimum Zones: From In Situ Community Rate Measurements to Single Cells)
attribute NC_GLOBAL Westernmost_Easting double -106.2833
variable BioProject   String  
attribute BioProject long_name String Bioproject
attribute BioProject units String unitless
variable BioSample   String  
attribute BioSample long_name String Biosample
attribute BioSample units String unitless
variable Sample   String  
attribute Sample long_name String Sample
attribute Sample units String unitless
variable SRA_Run   String  
attribute SRA_Run long_name String Sra_run
attribute SRA_Run units String unitless
variable SRA_Experiment   String  
attribute SRA_Experiment long_name String Sra_experiment
attribute SRA_Experiment units String unitless
variable depth   int  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth actual_range int 40, 1000
attribute depth axis String Z
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable latitude   float  
attribute latitude _CoordinateAxisType String Lat
attribute latitude actual_range float 18.1667, 18.8833
attribute latitude axis String Y
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   float  
attribute longitude _CoordinateAxisType String Lon
attribute longitude actual_range float -106.2833, -104.9
attribute longitude axis String X
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable Date   String  
attribute Date long_name String Date
attribute Date units String unitless
variable CTD_cast   int  
attribute CTD_cast actual_range int 15, 67
attribute CTD_cast long_name String Ctd_cast
attribute CTD_cast units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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