Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| Dataset Title: | [Protein abundance] - Protein Abundance data from Zn and CO2 culture experiments on the diatom Phaeodactylum tricornutum (Parsing the biogeochemistry of marine carbonic anhydrases) 
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| Institution: | BCO-DMO (Dataset ID: bcodmo_dataset_1011111_v1) |
| Information: | Summary
| License
| Metadata
| Background
| Files
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Attributes {
s {
NCBI_RefSeq {
String long_name "Ncbi_refseq";
String units "unitless";
}
UniProt_RefID {
String long_name "Uniprot_refid";
String units "unitless";
}
Treatment {
String long_name "Treatment";
String units "unitless";
}
Replicate {
String long_name "Replicate";
String units "unitless";
}
Protein_Abundance {
Float32 actual_range 668.102, 9.86e+8;
String long_name "Protein_abundance";
String units "unitless (relative)";
}
}
NC_GLOBAL {
String cdm_data_type "Other";
String Conventions "COARDS, CF-1.6, ACDD-1.3";
String creator_email "info@bco-dmo.org";
String creator_name "BCO-DMO";
String creator_url "https://www.bco-dmo.org/";
String doi "10.26008/1912/bco-dmo.1011111.1";
String history
"2026-11-14T16:41:32Z (local files)
2026-11-14T16:41:32Z https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1011111_v1.html";
String infoUrl "https://osprey.bco-dmo.org/dataset/1011111";
String institution "BCO-DMO";
String license
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
String sourceUrl "(local files)";
String summary
"Phaeodactylum tricornutum was grown under 6 different experimental treatments all carried out in biological triplicate. In a CO2 experiment, cultures were grown with replete Zn under varying pCO2 (200, 400, and 750 ppm CO2). In a Zn experiment, cultures were grown under ambient pCO2 (no modification to bubbling) with variable Zinc concentrations (3 nM, 30 nM, and 100 nM [Zn]T)
Here, proteomic data from experimental treatments are reported. We specifically look at the protein abundances of 3 relevant groups of proteins: carbonic anhydrase enzymes, bicarbonate transporters, metal stress biomarkers (Fe and Zn)
The data collected for this project are used to assess the plasticity of the model diatom Phaeodactylum tricornutum's CCMs, specifically carbonic anhydrase (CA) enzymes and bicarbonate transporters.";
String title "[Protein abundance] - Protein Abundance data from Zn and CO2 culture experiments on the diatom Phaeodactylum tricornutum (Parsing the biogeochemistry of marine carbonic anhydrases)";
}
}
Data Access Protocol (DAP) and its
selection constraints.
The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.
Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names,
followed by a collection of
constraints (e.g., variable<value),
each preceded by '&' (which is interpreted as "AND").
For details, see the tabledap Documentation.