ERDDAP > tabledap > Make A Graph

Dataset Title:	[Extracellular reef seawater metabolites from the Jardines de la Reina reef- system] - Sampling and accession information for extracellular reef seawater metabolites collected from the Jardines de la Reina reef-system, Cuba in November of 2017 (Signature exometabolomes of Caribbean corals and influences on reef picoplankton)
Institution:	BCO-DMO   (Dataset ID: bcodmo_dataset_843270_v1)
Range:	longitude = -79.59106 to -78.38107°E
Information:	Summary | License | Metadata | Background | Data Access Form | Files

 

Graph Type:  lines linesAndMarkers markers sticks X Axis:  Latitude longitude Replicate Y Axis:  Latitude longitude Replicate Color:  Latitude longitude Replicate   Constraints Optional Constraint #1 Optional Constraint #2 MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name     != =~ <= >= = < >     != =~ <= >= = < > MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name     != =~ <= >= = < >     != =~ <= >= = < > MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name     != =~ <= >= = < >     != =~ <= >= = < > MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name     != =~ <= >= = < >     != =~ <= >= = < > MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name     != =~ <= >= = < >     != =~ <= >= = < >   Server-side Functions  distinct() orderBy orderByDescending orderByClosest orderByCount orderByLimit orderByMax orderByMin orderByMinMax orderByMean orderBySum (" MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name MetaboLights_Study_Number Sample_Name reef site Seawater_collection_date Latitude longitude Sample_type Seawater_sampling_location Depth Replicate Profiling_mode Ion_mode raw_file_name derived_file_name ")   Graph Settings Marker Type:  None Plus X Dot Square Filled Square Circle Filled Circle Up Triangle Filled Up Triangle Borderless Filled Square Borderless Filled Circle Borderless Filled Up Triangle  Size:  3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 Color:  Color Bar:  BlackBlueWhite BlackGreenWhite BlackRedWhite BlackWhite BlueWhiteRed BlueWideWhiteRed LightRainbow Ocean OceanDepth Rainbow Rainbow2 Rainfall ReverseRainbow RedWhiteBlue RedWhiteBlue2 RedWideWhiteBlue Spectrum Topography TopographyDepth WhiteBlueBlack WhiteGreenBlack WhiteRedBlack WhiteBlack YellowRed KT_algae KT_amp KT_balance KT_curl KT_deep KT_delta KT_dense KT_gray KT_haline KT_ice KT_matter KT_oxy KT_phase KT_solar KT_speed KT_tempo KT_thermal KT_turbid  Continuity:  Continuous Discrete  Scale:  Linear Log    Minimum:   Maximum:   N Sections:  2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 Y Axis Minimum:   Maximum:    Ascending Descending Linear Log   Redraw the Graph (Please be patient. It may take a while to get the data.)   Optional: Then set the File Type: .asc .csv .csvp .csv0 .dataTable .das .dds .dods .esriCsv .fgdc .geoJson .graph .help .html .htmlTable .iso19115 .itx .json .jsonlCSV1 .jsonlCSV .jsonlKVP .mat .nc .ncHeader .ncCF .ncCFHeader .ncCFMA .ncCFMAHeader .nccsv .nccsvMetadata .ncoJson .odvTxt .subset .tsv .tsvp .tsv0 .wav .xhtml .kml .smallPdf .pdf .largePdf .smallPng .png .largePng .transparentPng (File Type information) and or view the URL: (Documentation / Bypass this form )

 

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Things You Can Do With Your Graphs

Well, you can do anything you want with your graphs, of course. But some things you might not have considered are:

• Web page authors can embed a graph of the latest data in a web page using HTML <img> tags.
• Anyone can use ERDDAPs Slide Sorter to build a personal web page that displays graphs with the latest data (or other images or HTML content), each in its own, draggable slide.
   

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The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  MetaboLights_Study_Number {
    String long_name "Metabolights_study_number";
    String units "unitless";
  }
  Sample_Name {
    String long_name "Sample_name";
    String units "unitless";
  }
  reef {
    String long_name "Reef";
    String units "unitless";
  }
  site {
    String long_name "Site";
    String units "unitless";
  }
  Seawater_collection_date {
    String long_name "Seawater_collection_date";
    String units "unitless";
  }
  Latitude {
    Float32 actual_range 20.5065, 21.30333;
    String long_name "Latitude";
    String units "degrees_north";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float32 actual_range -79.59106, -78.38107;
    String axis "X";
    String ioos_category "Location";
    String long_name "Longitude";
    String standard_name "longitude";
    String units "degrees_east";
  }
  Sample_type {
    String long_name "Sample_type";
    String units "unitless";
  }
  Seawater_sampling_location {
    String long_name "Seawater_sampling_location";
    String units "unitless";
  }
  Depth {
    String long_name "Depth";
    String units "unitless";
  }
  Replicate {
    Int32 actual_range 1, 8;
    String long_name "Replicate";
    String units "unitless";
  }
  Profiling_mode {
    String long_name "Profiling_mode";
    String units "unitless";
  }
  Ion_mode {
    String long_name "Ion_mode";
    String units "unitless";
  }
  raw_file_name {
    String long_name "Raw_file_name";
    String units "unitless";
  }
  derived_file_name {
    String long_name "Derived_file_name";
    String units "unitless";
  }
 }
  NC_GLOBAL {
    String cdm_data_type "Other";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_email "info@bco-dmo.org";
    String creator_name "BCO-DMO";
    String creator_url "https://www.bco-dmo.org/";
    String doi "10.26008/1912/bco-dmo.843270.1";
    Float64 Easternmost_Easting -78.38107;
    Float64 geospatial_lon_max -78.38107;
    Float64 geospatial_lon_min -79.59106;
    String geospatial_lon_units "degrees_east";
    String history 
"2024-11-20T08:23:55Z (local files)
2024-11-20T08:23:55Z https://erddap.bco-dmo.org/tabledap/bcodmo_dataset_843270_v1.das";
    String infoUrl "https://www.bco-dmo.org/dataset/843270";
    String institution "BCO-DMO";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    String sourceUrl "(local files)";
    String summary 
"This dataset contains sampling and accession information for extracellular reef seawater metabolites collected from two different depths across 9 different shallow forereefs in the Jardines de la Reina reef-system, Cuba. Reef seawater samples, collected in duplicate per depth and location, were subjected to targeted and untargeted liquid chromatography mass spectrometry (LC-MS) methods in addition to a suite of biogeochemical measurements (see Related Datasets for access to the biochemistry data). Raw and .mzML data files from the LC-MS methods are located at MetaboLights database, using accession number MTBLS1820.(Accessible from https://www.ebi.ac.uk/metabolights/MTBLS1820/). 

These data were published in Weber et al. (2020).";
    String title "[Extracellular reef seawater metabolites from the Jardines de la Reina reef-system] - Sampling and accession information for extracellular reef seawater metabolites collected from the Jardines de la Reina reef-system, Cuba in November of 2017 (Signature exometabolomes of Caribbean corals and influences on reef picoplankton)";
    Float64 Westernmost_Easting -79.59106;
  }
}

 

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Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP Data Access Protocol (DAP) and its selection constraints.

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

• (easy) You can get data by using the dataset's Data Access Form or Subset form. They make the URL for you.
• (easy) You can make a graph or map by using the dataset's Make A Graph form. It makes the URL for you.
• (not hard) You can bypass the forms and get the data or make a graph or map by generating the URL by hand or with a computer program or script.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.

 

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