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   set  data   graph     files  public Metabarcoding zooplankton at station ALOHA: Operational taxonomic unit (OTU) tables and fasta
files for representative sequences from each OTU (Plankton Population Genetics project)
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The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute NC_GLOBAL acquisition_description String Sample Codes:

Read count parameter names (e.g. FA3_N7_SF1) include the following three
codes:

MOCNESS tow
FA3: Night sampling
FA4: Day sampling

Depth range:
N1: 1500-1000m
N2: 1000-700m
N3: 700-500m
N4: 500-300m
N5: 300-200m
N6: 200-150m
N7: 150-100m
N8: 100-50m
N9: 50m-0m

Wet-sieved zooplankton size fractions
SF1: 0.2-0.5 mm
SF2: 0.5-1.0 mm
SF3: 1.0-2.0 mm

Data parameters with the prefix (NCBI_) are from the National Center for
Biotechnology Information (NCBI,
[https://www.ncbi.nlm.nih.gov/](\\"https://www.ncbi.nlm.nih.gov/\\"))

Data parameters with the prefix (silva_) are from the Silva database
([https://www.arb-silva.de/](\\"https://www.arb-silva.de/\\")).
attribute NC_GLOBAL awards_0_award_nid String 473046
attribute NC_GLOBAL awards_0_award_number String OCE-1255697
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward?AWD_ID=1255697 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL awards_1_award_nid String 537990
attribute NC_GLOBAL awards_1_award_number String OCE-1338959
attribute NC_GLOBAL awards_1_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1338959 (external link)
attribute NC_GLOBAL awards_1_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_1_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_1_funding_source_nid String 355
attribute NC_GLOBAL awards_1_program_manager String David L. Garrison
attribute NC_GLOBAL awards_1_program_manager_nid String 50534
attribute NC_GLOBAL awards_2_award_nid String 539716
attribute NC_GLOBAL awards_2_award_number String OCE-1029478
attribute NC_GLOBAL awards_2_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1029478 (external link)
attribute NC_GLOBAL awards_2_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_2_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_2_funding_source_nid String 355
attribute NC_GLOBAL awards_2_program_manager String David L. Garrison
attribute NC_GLOBAL awards_2_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String ALOHA Zooplankton metabarcoding: OTU
PI: Erica Goetze
data version: 07 Jun 2017
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3 19 Dec 2019
attribute NC_GLOBAL date_created String 2017-05-18T17:30:39Z
attribute NC_GLOBAL date_modified String 2020-02-21T18:52:47Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.704664
attribute NC_GLOBAL Easternmost_Easting double -158.0
attribute NC_GLOBAL geospatial_lat_max double 22.75
attribute NC_GLOBAL geospatial_lat_min double 22.75
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -158.0
attribute NC_GLOBAL geospatial_lon_min double -158.0
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/700279 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String Automated Sequencer
attribute NC_GLOBAL instruments_0_dataset_instrument_description String Illumina MiSeq using V3 chemistry (300-bp, paired-end)
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 700787
attribute NC_GLOBAL instruments_0_description String General term for a laboratory instrument used for deciphering the order of bases in a strand of DNA. Sanger sequencers detect fluorescence from different dyes that are used to identify the A, C, G, and T extension reactions. Contemporary or Pyrosequencer methods are based on detecting the activity of DNA polymerase (a DNA synthesizing enzyme) with another chemoluminescent enzyme. Essentially, the method allows sequencing of a single strand of DNA by synthesizing the complementary strand along it, one base pair at a time, and detecting which base was actually added at each step.
attribute NC_GLOBAL instruments_0_instrument_name String Automated DNA Sequencer
attribute NC_GLOBAL instruments_0_instrument_nid String 649
attribute NC_GLOBAL instruments_0_supplied_name String Illumina MiSeq
attribute NC_GLOBAL instruments_1_acronym String Thermal Cycler
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 700789
attribute NC_GLOBAL instruments_1_description String General term for a laboratory apparatus commonly used for performing polymerase chain reaction (PCR). The device has a thermal block with holes where tubes with the PCR reaction mixtures can be inserted. The cycler then raises and lowers the temperature of the block in discrete, pre-programmed steps.

(adapted from http://serc.carleton.edu/microbelife/research_methods/genomics/pcr.html)
attribute NC_GLOBAL instruments_1_instrument_name String PCR Thermal Cycler
attribute NC_GLOBAL instruments_1_instrument_nid String 471582
attribute NC_GLOBAL instruments_1_supplied_name String quantitative PCR by the Evolutionary Genetics Core Facility (Hawaii Institute of Marine Biology)
attribute NC_GLOBAL instruments_2_acronym String Bioanalyzer
attribute NC_GLOBAL instruments_2_dataset_instrument_nid String 700788
attribute NC_GLOBAL instruments_2_description String A Bioanalyzer is a laboratory instrument that provides the sizing and quantification of DNA, RNA, and proteins. One example is the Agilent Bioanalyzer 2100.
attribute NC_GLOBAL instruments_2_instrument_name String Bioanalyzer
attribute NC_GLOBAL instruments_2_instrument_nid String 626182
attribute NC_GLOBAL instruments_2_supplied_name String Agilent 2100 Bioanalyzer
attribute NC_GLOBAL keywords String analysis, analysis_description, analysis_name, assigned, assigned_habitat, bco, bco-dmo, biological, bitscore, chemical, coverage, data, dataset, description, dmo, erddap, evalue, fa3, FA3_N1_SF1, FA3_N1_SF2, FA3_N1_SF3, FA3_N2_SF1, FA3_N2_SF2, FA3_N2_SF3, FA3_N3_SF1, FA3_N3_SF2, FA3_N3_SF3, FA3_N4_SF1, FA3_N4_SF2, FA3_N4_SF3, FA3_N5_SF1, FA3_N5_SF2, FA3_N5_SF3, FA3_N6_SF1, FA3_N6_SF2, FA3_N6_SF3, FA3_N7_SF1, FA3_N7_SF2, FA3_N7_SF3, FA3_N8_SF1, FA3_N8_SF2, FA3_N8_SF3, FA3_N9_SF1, FA3_N9_SF2, FA3_N9_SF3, fa4, FA4_N1_SF1, FA4_N1_SF2, FA4_N1_SF3, FA4_N2_SF1, FA4_N2_SF2, FA4_N2_SF3, FA4_N3_SF1, FA4_N3_SF2, FA4_N3_SF3, FA4_N4_SF1, FA4_N4_SF2, FA4_N4_SF3, FA4_N5_SF1, FA4_N5_SF2, FA4_N5_SF3, FA4_N6_SF1, FA4_N6_SF2, FA4_N6_SF3, FA4_N7_SF1, FA4_N7_SF2, FA4_N7_SF3, FA4_N8_SF1, FA4_N8_SF2, FA4_N8_SF3, FA4_N9_SF1, FA4_N9_SF2, FA4_N9_SF3, habitat, hit, identity, latitude, length, level1, level10, level11, level12, level13, level14, level2, level3, level4, level5, level6, level7, level8, level9, longitude, management, mismatch, name, ncbi, NCBI_bitscore, NCBI_evalue, NCBI_mismatch, NCBI_percent_coverage, NCBI_percent_identity, NCBI_percent_positive, NCBI_query_sequence_id, NCBI_sequence_length, NCBI_top_hit, NCBI_top_hit_taxID, NCBI_top_hit_title, oceanography, office, otu, OTU_ID, percent, positive, preliminary, query, sequence, sf1, sf2, sf3, silva, silva_tax_level1, silva_tax_level10, silva_tax_level11, silva_tax_level12, silva_tax_level13, silva_tax_level14, silva_tax_level2, silva_tax_level3, silva_tax_level4, silva_tax_level5, silva_tax_level6, silva_tax_level7, silva_tax_level8, silva_tax_level9, tax, title, top
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/700279/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/700279 (external link)
attribute NC_GLOBAL Northernmost_Northing double 22.75
attribute NC_GLOBAL param_mapping String {'700279': {'lat': 'master - latitude', 'lon': 'master - longitude'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/700279/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of Hawaii
attribute NC_GLOBAL people_0_person_name String Erica Goetze
attribute NC_GLOBAL people_0_person_nid String 473048
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String University of Hawaii
attribute NC_GLOBAL people_1_person_name String Erica Goetze
attribute NC_GLOBAL people_1_person_nid String 473048
attribute NC_GLOBAL people_1_role String Contact
attribute NC_GLOBAL people_1_role_type String related
attribute NC_GLOBAL people_2_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_2_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_2_person_name String Amber York
attribute NC_GLOBAL people_2_person_nid String 643627
attribute NC_GLOBAL people_2_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL project String Plankton Population Genetics
attribute NC_GLOBAL projects_0_acronym String Plankton Population Genetics
attribute NC_GLOBAL projects_0_description String Description from NSF award abstract:
Marine zooplankton show strong ecological responses to climate change, but little is known about their capacity for evolutionary response. Many authors have assumed that the evolutionary potential of zooplankton is limited. However, recent studies provide circumstantial evidence for the idea that selection is a dominant evolutionary force acting on these species, and that genetic isolation can be achieved at regional spatial scales in pelagic habitats. This RAPID project will take advantage of a unique opportunity for basin-scale transect sampling through participation in the Atlantic Meridional Transect (AMT) cruise in 2014. The cruise will traverse more than 90 degrees of latitude in the Atlantic Ocean and include boreal-temperate, subtropical and tropical waters. Zooplankton samples will be collected along the transect, and mitochondrial and microsatellite markers will be used to identify the geographic location of strong genetic breaks within three copepod species. Bayesian and coalescent analytical techniques will test if these regions act as dispersal barriers. The physiological condition of animals collected in distinct ocean habitats will be assessed by measurements of egg production (at sea) as well as body size (condition index), dry weight, and carbon and nitrogen content. The PI will test the prediction that ocean regions that serve as dispersal barriers for marine holoplankton are areas of poor-quality habitat for the target species, and that this is a dominant mechanism driving population genetic structure in oceanic zooplankton.
Note: This project is funded by an NSF RAPID award. This RAPID grant supported the shiptime costs, and all the sampling reported in the AMT24 zooplankton ecology cruise report (PDF).
Online science outreach blog at: https://atlanticplankton.wordpress.com
attribute NC_GLOBAL projects_0_end_date String 2015-11
attribute NC_GLOBAL projects_0_geolocation String Atlantic Ocean, 46 N - 46 S
attribute NC_GLOBAL projects_0_name String Basin-scale genetics of marine zooplankton
attribute NC_GLOBAL projects_0_project_nid String 537991
attribute NC_GLOBAL projects_0_start_date String 2013-12
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 22.75
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL subsetVariables String latitude,longitude,silva_tax_level1,silva_tax_level2,silva_tax_level3,silva_tax_level4,silva_tax_level5
attribute NC_GLOBAL summary String Metabarcoding data for the zooplankton community in the epipelagic, mesopelagic and upper bathypelagic zones (0-1500m) of the North Pacific Subtropical Gyre. The goal of this study was to assess the hidden diversity present in zooplankton assemblages in midwaters, and detect vertical gradients in species richness, depth distributions, and community composition of the full zooplankton assemblage. Samples were collected in June 2014 from Station ALOHA (22.75, -158) using a 1-meter square Multiple Opening and Closing Nets and Environmental Sampling System (MOCNESS, 200um mesh), on R/V Falkor cruise FK140613. Next generation sequence data (Illumina MiSeq, V3 chemistry, 300-bp paired-end) of the zooplankton assemblage derive from amplicons of the V1-V2 region of 18S rRNA (primers described in Fonseca et al. 2010). The data includes sequences and read count abundance information for molecular OTUs from both holoplanktonic and meroplanktonic taxa. All results derive from analyses in mothur v1.36.1 (Schloss et al. 2009, Kozich et al. 2013).
attribute NC_GLOBAL title String Metabarcoding zooplankton at station ALOHA: Operational taxonomic unit (OTU) tables and fasta files for representative sequences from each OTU (Plankton Population Genetics project)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL Westernmost_Easting double -158.0
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable analysis_name   String  
attribute analysis_name bcodmo_name String sample_descrip
attribute analysis_name description String Descriptive name of analysis including percent clustering and subsampling or no subsampling
attribute analysis_name long_name String Analysis Name
attribute analysis_name units String unitless
variable latitude   double  
attribute latitude _CoordinateAxisType String Lat
attribute latitude _FillValue double NaN
attribute latitude actual_range double 22.75, 22.75
attribute latitude axis String Y
attribute latitude bcodmo_name String latitude
attribute latitude colorBarMaximum double 90.0
attribute latitude colorBarMinimum double -90.0
attribute latitude description String Latitude of sample site (Station ALOHA)
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude   double  
attribute longitude _CoordinateAxisType String Lon
attribute longitude _FillValue double NaN
attribute longitude actual_range double -158.0, -158.0
attribute longitude axis String X
attribute longitude bcodmo_name String longitude
attribute longitude colorBarMaximum double 180.0
attribute longitude colorBarMinimum double -180.0
attribute longitude description String Longitude of sample site (Station ALOHA)
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable analysis_description   String  
attribute analysis_description bcodmo_name String sample_descrip
attribute analysis_description description String Analysis description
attribute analysis_description long_name String Analysis Description
attribute analysis_description units String unitless
variable OTU_ID   String  
attribute OTU_ID bcodmo_name String sample
attribute OTU_ID description String Operational taxonomic unit (OTU) identifier
attribute OTU_ID long_name String OTU ID
attribute OTU_ID nerc_identifier String https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ (external link)
attribute OTU_ID units String unitless
variable FA3_N1_SF1   short  
attribute FA3_N1_SF1 _FillValue short 32767
attribute FA3_N1_SF1 actual_range short 0, 7364
attribute FA3_N1_SF1 bcodmo_name String count
attribute FA3_N1_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 1 (depth 1500-1000m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N1_SF1 long_name String FA3 N1 SF1
attribute FA3_N1_SF1 units String per OTU
variable FA3_N1_SF2   short  
attribute FA3_N1_SF2 _FillValue short 32767
attribute FA3_N1_SF2 actual_range short 0, 4949
attribute FA3_N1_SF2 bcodmo_name String count
attribute FA3_N1_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 1 (depth 1500-1000m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N1_SF2 long_name String FA3 N1 SF2
attribute FA3_N1_SF2 units String per OTU
variable FA3_N1_SF3   short  
attribute FA3_N1_SF3 _FillValue short 32767
attribute FA3_N1_SF3 actual_range short 0, 8094
attribute FA3_N1_SF3 bcodmo_name String count
attribute FA3_N1_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 1 (depth 1500-1000m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N1_SF3 long_name String FA3 N1 SF3
attribute FA3_N1_SF3 units String per OTU
variable FA3_N2_SF1   short  
attribute FA3_N2_SF1 _FillValue short 32767
attribute FA3_N2_SF1 actual_range short 0, 6604
attribute FA3_N2_SF1 bcodmo_name String count
attribute FA3_N2_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 2 (depth 1000-700m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N2_SF1 long_name String FA3 N2 SF1
attribute FA3_N2_SF1 units String per OTU
variable FA3_N2_SF2   short  
attribute FA3_N2_SF2 _FillValue short 32767
attribute FA3_N2_SF2 actual_range short 0, 5141
attribute FA3_N2_SF2 bcodmo_name String count
attribute FA3_N2_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 2 (depth 1000-700m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N2_SF2 long_name String FA3 N2 SF2
attribute FA3_N2_SF2 units String per OTU
variable FA3_N2_SF3   short  
attribute FA3_N2_SF3 _FillValue short 32767
attribute FA3_N2_SF3 actual_range short 0, 7433
attribute FA3_N2_SF3 bcodmo_name String count
attribute FA3_N2_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 2 (depth 1000-700m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N2_SF3 long_name String FA3 N2 SF3
attribute FA3_N2_SF3 units String per OTU
variable FA3_N3_SF1   short  
attribute FA3_N3_SF1 _FillValue short 32767
attribute FA3_N3_SF1 actual_range short 0, 8763
attribute FA3_N3_SF1 bcodmo_name String count
attribute FA3_N3_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 3 (depth 700-500m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N3_SF1 long_name String FA3 N3 SF1
attribute FA3_N3_SF1 units String per OTU
variable FA3_N3_SF2   short  
attribute FA3_N3_SF2 _FillValue short 32767
attribute FA3_N3_SF2 actual_range short 0, 5019
attribute FA3_N3_SF2 bcodmo_name String count
attribute FA3_N3_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 3 (depth 700-500m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N3_SF2 long_name String FA3 N3 SF2
attribute FA3_N3_SF2 units String per OTU
variable FA3_N3_SF3   short  
attribute FA3_N3_SF3 _FillValue short 32767
attribute FA3_N3_SF3 actual_range short 0, 12487
attribute FA3_N3_SF3 bcodmo_name String count
attribute FA3_N3_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 3 (depth 700-500m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N3_SF3 long_name String FA3 N3 SF3
attribute FA3_N3_SF3 units String per OTU
variable FA3_N4_SF1   short  
attribute FA3_N4_SF1 _FillValue short 32767
attribute FA3_N4_SF1 actual_range short 0, 9644
attribute FA3_N4_SF1 bcodmo_name String count
attribute FA3_N4_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 4 (depth 500-300m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N4_SF1 long_name String FA3 N4 SF1
attribute FA3_N4_SF1 units String per OTU
variable FA3_N4_SF2   short  
attribute FA3_N4_SF2 _FillValue short 32767
attribute FA3_N4_SF2 actual_range short 0, 3869
attribute FA3_N4_SF2 bcodmo_name String count
attribute FA3_N4_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 4 (depth 500-300m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N4_SF2 long_name String FA3 N4 SF2
attribute FA3_N4_SF2 units String per OTU
variable FA3_N4_SF3   short  
attribute FA3_N4_SF3 _FillValue short 32767
attribute FA3_N4_SF3 actual_range short 0, 6198
attribute FA3_N4_SF3 bcodmo_name String count
attribute FA3_N4_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 4 (depth 500-300m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N4_SF3 long_name String FA3 N4 SF3
attribute FA3_N4_SF3 units String per OTU
variable FA3_N5_SF1   short  
attribute FA3_N5_SF1 _FillValue short 32767
attribute FA3_N5_SF1 actual_range short 0, 4527
attribute FA3_N5_SF1 bcodmo_name String count
attribute FA3_N5_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 5 (depth 300-200m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N5_SF1 long_name String FA3 N5 SF1
attribute FA3_N5_SF1 units String per OTU
variable FA3_N5_SF2   short  
attribute FA3_N5_SF2 _FillValue short 32767
attribute FA3_N5_SF2 actual_range short 0, 5328
attribute FA3_N5_SF2 bcodmo_name String count
attribute FA3_N5_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 5 (depth 300-200m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N5_SF2 long_name String FA3 N5 SF2
attribute FA3_N5_SF2 units String per OTU
variable FA3_N5_SF3   short  
attribute FA3_N5_SF3 _FillValue short 32767
attribute FA3_N5_SF3 actual_range short 0, 4550
attribute FA3_N5_SF3 bcodmo_name String count
attribute FA3_N5_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 5 (depth 300-200m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N5_SF3 long_name String FA3 N5 SF3
attribute FA3_N5_SF3 units String per OTU
variable FA3_N6_SF1   short  
attribute FA3_N6_SF1 _FillValue short 32767
attribute FA3_N6_SF1 actual_range short 0, 7969
attribute FA3_N6_SF1 bcodmo_name String count
attribute FA3_N6_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 6 (depth 200-150m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N6_SF1 long_name String FA3 N6 SF1
attribute FA3_N6_SF1 units String per OTU
variable FA3_N6_SF2   short  
attribute FA3_N6_SF2 _FillValue short 32767
attribute FA3_N6_SF2 actual_range short 0, 4425
attribute FA3_N6_SF2 bcodmo_name String count
attribute FA3_N6_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 6 (depth 200-150m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N6_SF2 long_name String FA3 N6 SF2
attribute FA3_N6_SF2 units String per OTU
variable FA3_N6_SF3   short  
attribute FA3_N6_SF3 _FillValue short 32767
attribute FA3_N6_SF3 actual_range short 0, 4415
attribute FA3_N6_SF3 bcodmo_name String count
attribute FA3_N6_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 6 (depth 200-150m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N6_SF3 long_name String FA3 N6 SF3
attribute FA3_N6_SF3 units String per OTU
variable FA3_N7_SF1   short  
attribute FA3_N7_SF1 _FillValue short 32767
attribute FA3_N7_SF1 actual_range short 0, 4878
attribute FA3_N7_SF1 bcodmo_name String count
attribute FA3_N7_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 7 (depth 150-100m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N7_SF1 long_name String FA3 N7 SF1
attribute FA3_N7_SF1 units String per OTU
variable FA3_N7_SF2   short  
attribute FA3_N7_SF2 _FillValue short 32767
attribute FA3_N7_SF2 actual_range short 0, 7900
attribute FA3_N7_SF2 bcodmo_name String count
attribute FA3_N7_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 7 (depth 150-100m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N7_SF2 long_name String FA3 N7 SF2
attribute FA3_N7_SF2 units String per OTU
variable FA3_N7_SF3   short  
attribute FA3_N7_SF3 _FillValue short 32767
attribute FA3_N7_SF3 actual_range short 0, 9275
attribute FA3_N7_SF3 bcodmo_name String count
attribute FA3_N7_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 7 (depth 150-100m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N7_SF3 long_name String FA3 N7 SF3
attribute FA3_N7_SF3 units String per OTU
variable FA3_N8_SF1   short  
attribute FA3_N8_SF1 _FillValue short 32767
attribute FA3_N8_SF1 actual_range short 0, 3200
attribute FA3_N8_SF1 bcodmo_name String count
attribute FA3_N8_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 8 (depth 100-50m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N8_SF1 long_name String FA3 N8 SF1
attribute FA3_N8_SF1 units String per OTU
variable FA3_N8_SF2   short  
attribute FA3_N8_SF2 _FillValue short 32767
attribute FA3_N8_SF2 actual_range short 0, 5023
attribute FA3_N8_SF2 bcodmo_name String count
attribute FA3_N8_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 8 (depth 100-50m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N8_SF2 long_name String FA3 N8 SF2
attribute FA3_N8_SF2 units String per OTU
variable FA3_N8_SF3   short  
attribute FA3_N8_SF3 _FillValue short 32767
attribute FA3_N8_SF3 actual_range short 0, 4242
attribute FA3_N8_SF3 bcodmo_name String count
attribute FA3_N8_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 8 (depth 100-50m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N8_SF3 long_name String FA3 N8 SF3
attribute FA3_N8_SF3 units String per OTU
variable FA3_N9_SF1   short  
attribute FA3_N9_SF1 _FillValue short 32767
attribute FA3_N9_SF1 actual_range short 0, 6807
attribute FA3_N9_SF1 bcodmo_name String count
attribute FA3_N9_SF1 description String Read counts for each OTU within each sample; Sample collected during the day with net 9 (depth 50-0m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA3_N9_SF1 long_name String FA3 N9 SF1
attribute FA3_N9_SF1 units String per OTU
variable FA3_N9_SF2   short  
attribute FA3_N9_SF2 _FillValue short 32767
attribute FA3_N9_SF2 actual_range short 0, 5171
attribute FA3_N9_SF2 bcodmo_name String count
attribute FA3_N9_SF2 description String Read counts for each OTU within each sample; Sample collected during the day with net 9 (depth 50-0m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA3_N9_SF2 long_name String FA3 N9 SF2
attribute FA3_N9_SF2 units String per OTU
variable FA3_N9_SF3   short  
attribute FA3_N9_SF3 _FillValue short 32767
attribute FA3_N9_SF3 actual_range short 0, 6503
attribute FA3_N9_SF3 bcodmo_name String count
attribute FA3_N9_SF3 description String Read counts for each OTU within each sample; Sample collected during the day with net 9 (depth 50-0m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA3_N9_SF3 long_name String FA3 N9 SF3
attribute FA3_N9_SF3 units String per OTU
variable FA4_N1_SF1   short  
attribute FA4_N1_SF1 _FillValue short 32767
attribute FA4_N1_SF1 actual_range short 0, 10244
attribute FA4_N1_SF1 bcodmo_name String count
attribute FA4_N1_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 1 (depth 1500-1000m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N1_SF1 long_name String FA4 N1 SF1
attribute FA4_N1_SF1 units String per OTU
variable FA4_N1_SF2   short  
attribute FA4_N1_SF2 _FillValue short 32767
attribute FA4_N1_SF2 actual_range short 0, 2920
attribute FA4_N1_SF2 bcodmo_name String count
attribute FA4_N1_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 1 (depth 1500-1000m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N1_SF2 long_name String FA4 N1 SF2
attribute FA4_N1_SF2 units String per OTU
variable FA4_N1_SF3   short  
attribute FA4_N1_SF3 _FillValue short 32767
attribute FA4_N1_SF3 actual_range short 0, 4335
attribute FA4_N1_SF3 bcodmo_name String count
attribute FA4_N1_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 1 (depth 1500-1000m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N1_SF3 long_name String FA4 N1 SF3
attribute FA4_N1_SF3 units String per OTU
variable FA4_N2_SF1   short  
attribute FA4_N2_SF1 _FillValue short 32767
attribute FA4_N2_SF1 actual_range short 0, 12299
attribute FA4_N2_SF1 bcodmo_name String count
attribute FA4_N2_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 2 (depth 1000-700m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N2_SF1 long_name String FA4 N2 SF1
attribute FA4_N2_SF1 units String per OTU
variable FA4_N2_SF2   short  
attribute FA4_N2_SF2 _FillValue short 32767
attribute FA4_N2_SF2 actual_range short 0, 4615
attribute FA4_N2_SF2 bcodmo_name String count
attribute FA4_N2_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 2 (depth 1000-700m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N2_SF2 long_name String FA4 N2 SF2
attribute FA4_N2_SF2 units String per OTU
variable FA4_N2_SF3   short  
attribute FA4_N2_SF3 _FillValue short 32767
attribute FA4_N2_SF3 actual_range short 0, 3261
attribute FA4_N2_SF3 bcodmo_name String count
attribute FA4_N2_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 2 (depth 1000-700m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N2_SF3 long_name String FA4 N2 SF3
attribute FA4_N2_SF3 units String per OTU
variable FA4_N3_SF1   short  
attribute FA4_N3_SF1 _FillValue short 32767
attribute FA4_N3_SF1 actual_range short 0, 4816
attribute FA4_N3_SF1 bcodmo_name String count
attribute FA4_N3_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 3 (depth 700-500m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N3_SF1 long_name String FA4 N3 SF1
attribute FA4_N3_SF1 units String per OTU
variable FA4_N3_SF2   short  
attribute FA4_N3_SF2 _FillValue short 32767
attribute FA4_N3_SF2 actual_range short 0, 2771
attribute FA4_N3_SF2 bcodmo_name String count
attribute FA4_N3_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 3 (depth 700-500m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N3_SF2 long_name String FA4 N3 SF2
attribute FA4_N3_SF2 units String per OTU
variable FA4_N3_SF3   short  
attribute FA4_N3_SF3 _FillValue short 32767
attribute FA4_N3_SF3 actual_range short 0, 9249
attribute FA4_N3_SF3 bcodmo_name String count
attribute FA4_N3_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 3 (depth 700-500m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N3_SF3 long_name String FA4 N3 SF3
attribute FA4_N3_SF3 units String per OTU
variable FA4_N4_SF1   short  
attribute FA4_N4_SF1 _FillValue short 32767
attribute FA4_N4_SF1 actual_range short 0, 5454
attribute FA4_N4_SF1 bcodmo_name String count
attribute FA4_N4_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 4 (depth 500-300m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N4_SF1 long_name String FA4 N4 SF1
attribute FA4_N4_SF1 units String per OTU
variable FA4_N4_SF2   short  
attribute FA4_N4_SF2 _FillValue short 32767
attribute FA4_N4_SF2 actual_range short 0, 5080
attribute FA4_N4_SF2 bcodmo_name String count
attribute FA4_N4_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 4 (depth 500-300m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N4_SF2 long_name String FA4 N4 SF2
attribute FA4_N4_SF2 units String per OTU
variable FA4_N4_SF3   short  
attribute FA4_N4_SF3 _FillValue short 32767
attribute FA4_N4_SF3 actual_range short 0, 6324
attribute FA4_N4_SF3 bcodmo_name String count
attribute FA4_N4_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 4 (depth 500-300m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N4_SF3 long_name String FA4 N4 SF3
attribute FA4_N4_SF3 units String per OTU
variable FA4_N5_SF1   short  
attribute FA4_N5_SF1 _FillValue short 32767
attribute FA4_N5_SF1 actual_range short 0, 2578
attribute FA4_N5_SF1 bcodmo_name String count
attribute FA4_N5_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 5 (depth 300-200m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N5_SF1 long_name String FA4 N5 SF1
attribute FA4_N5_SF1 units String per OTU
variable FA4_N5_SF2   short  
attribute FA4_N5_SF2 _FillValue short 32767
attribute FA4_N5_SF2 actual_range short 0, 2099
attribute FA4_N5_SF2 bcodmo_name String count
attribute FA4_N5_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 5 (depth 300-200m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N5_SF2 long_name String FA4 N5 SF2
attribute FA4_N5_SF2 units String per OTU
variable FA4_N5_SF3   short  
attribute FA4_N5_SF3 _FillValue short 32767
attribute FA4_N5_SF3 actual_range short 0, 3131
attribute FA4_N5_SF3 bcodmo_name String count
attribute FA4_N5_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 5 (depth 300-200m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N5_SF3 long_name String FA4 N5 SF3
attribute FA4_N5_SF3 units String per OTU
variable FA4_N6_SF1   short  
attribute FA4_N6_SF1 _FillValue short 32767
attribute FA4_N6_SF1 actual_range short 0, 5948
attribute FA4_N6_SF1 bcodmo_name String count
attribute FA4_N6_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 6 (depth 200-150m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N6_SF1 long_name String FA4 N6 SF1
attribute FA4_N6_SF1 units String per OTU
variable FA4_N6_SF2   short  
attribute FA4_N6_SF2 _FillValue short 32767
attribute FA4_N6_SF2 actual_range short 0, 1808
attribute FA4_N6_SF2 bcodmo_name String count
attribute FA4_N6_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 6 (depth 200-150m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N6_SF2 long_name String FA4 N6 SF2
attribute FA4_N6_SF2 units String per OTU
variable FA4_N6_SF3   short  
attribute FA4_N6_SF3 _FillValue short 32767
attribute FA4_N6_SF3 actual_range short 0, 2068
attribute FA4_N6_SF3 bcodmo_name String count
attribute FA4_N6_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 6 (depth 200-150m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N6_SF3 long_name String FA4 N6 SF3
attribute FA4_N6_SF3 units String per OTU
variable FA4_N7_SF1   short  
attribute FA4_N7_SF1 _FillValue short 32767
attribute FA4_N7_SF1 actual_range short 0, 2780
attribute FA4_N7_SF1 bcodmo_name String count
attribute FA4_N7_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 7 (depth 150-100m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N7_SF1 long_name String FA4 N7 SF1
attribute FA4_N7_SF1 units String per OTU
variable FA4_N7_SF2   short  
attribute FA4_N7_SF2 _FillValue short 32767
attribute FA4_N7_SF2 actual_range short 0, 2858
attribute FA4_N7_SF2 bcodmo_name String count
attribute FA4_N7_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 7 (depth 150-100m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N7_SF2 long_name String FA4 N7 SF2
attribute FA4_N7_SF2 units String per OTU
variable FA4_N7_SF3   short  
attribute FA4_N7_SF3 _FillValue short 32767
attribute FA4_N7_SF3 actual_range short 0, 2343
attribute FA4_N7_SF3 bcodmo_name String count
attribute FA4_N7_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 7 (depth 150-100m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N7_SF3 long_name String FA4 N7 SF3
attribute FA4_N7_SF3 units String per OTU
variable FA4_N8_SF1   short  
attribute FA4_N8_SF1 _FillValue short 32767
attribute FA4_N8_SF1 actual_range short 0, 2073
attribute FA4_N8_SF1 bcodmo_name String count
attribute FA4_N8_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 8 (depth 100-50m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N8_SF1 long_name String FA4 N8 SF1
attribute FA4_N8_SF1 units String per OTU
variable FA4_N8_SF2   short  
attribute FA4_N8_SF2 _FillValue short 32767
attribute FA4_N8_SF2 actual_range short 0, 3114
attribute FA4_N8_SF2 bcodmo_name String count
attribute FA4_N8_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 8 (depth 100-50m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N8_SF2 long_name String FA4 N8 SF2
attribute FA4_N8_SF2 units String per OTU
variable FA4_N8_SF3   short  
attribute FA4_N8_SF3 _FillValue short 32767
attribute FA4_N8_SF3 actual_range short 0, 2612
attribute FA4_N8_SF3 bcodmo_name String count
attribute FA4_N8_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 8 (depth 100-50m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N8_SF3 long_name String FA4 N8 SF3
attribute FA4_N8_SF3 units String per OTU
variable FA4_N9_SF1   short  
attribute FA4_N9_SF1 _FillValue short 32767
attribute FA4_N9_SF1 actual_range short 0, 5854
attribute FA4_N9_SF1 bcodmo_name String count
attribute FA4_N9_SF1 description String Read counts for each OTU within each sample; Sample collected during the night with net 9 (depth 50-0m) for zooplankton size fraction 1 (0.2 - 0.5mm)
attribute FA4_N9_SF1 long_name String FA4 N9 SF1
attribute FA4_N9_SF1 units String per OTU
variable FA4_N9_SF2   short  
attribute FA4_N9_SF2 _FillValue short 32767
attribute FA4_N9_SF2 actual_range short 0, 3559
attribute FA4_N9_SF2 bcodmo_name String count
attribute FA4_N9_SF2 description String Read counts for each OTU within each sample; Sample collected during the night with net 9 (depth 50-0m) for zooplankton size fraction 2 (0.5 - 0.1mm)
attribute FA4_N9_SF2 long_name String FA4 N9 SF2
attribute FA4_N9_SF2 units String per OTU
variable FA4_N9_SF3   short  
attribute FA4_N9_SF3 _FillValue short 32767
attribute FA4_N9_SF3 actual_range short 0, 2406
attribute FA4_N9_SF3 bcodmo_name String count
attribute FA4_N9_SF3 description String Read counts for each OTU within each sample; Sample collected during the night with net 9 (depth 50-0m) for zooplankton size fraction 3 (1.0 - 2.0 mm)
attribute FA4_N9_SF3 long_name String FA4 N9 SF3
attribute FA4_N9_SF3 units String per OTU
variable silva_tax_level1   String  
attribute silva_tax_level1 bcodmo_name String taxon
attribute silva_tax_level1 description String Taxonomic classification level 1 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level1 long_name String Silva Tax Level1
attribute silva_tax_level1 units String unitless
variable silva_tax_level2   String  
attribute silva_tax_level2 bcodmo_name String taxon
attribute silva_tax_level2 description String Taxonomic classification level 2 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level2 long_name String Silva Tax Level2
attribute silva_tax_level2 units String unitless
variable silva_tax_level3   String  
attribute silva_tax_level3 bcodmo_name String taxon
attribute silva_tax_level3 description String Taxonomic classification level 3 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level3 long_name String Silva Tax Level3
attribute silva_tax_level3 units String unitless
variable silva_tax_level4   String  
attribute silva_tax_level4 bcodmo_name String taxon
attribute silva_tax_level4 description String Taxonomic classification level 4 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level4 long_name String Silva Tax Level4
attribute silva_tax_level4 units String unitless
variable silva_tax_level5   String  
attribute silva_tax_level5 bcodmo_name String taxon
attribute silva_tax_level5 description String Taxonomic classification level 5 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level5 long_name String Silva Tax Level5
attribute silva_tax_level5 units String unitless
variable silva_tax_level6   String  
attribute silva_tax_level6 bcodmo_name String taxon
attribute silva_tax_level6 description String Taxonomic classification level 6 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level6 long_name String Silva Tax Level6
attribute silva_tax_level6 units String unitless
variable silva_tax_level7   String  
attribute silva_tax_level7 bcodmo_name String taxon
attribute silva_tax_level7 description String Taxonomic classification level 7 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level7 long_name String Silva Tax Level7
attribute silva_tax_level7 units String unitless
variable silva_tax_level8   String  
attribute silva_tax_level8 bcodmo_name String taxon
attribute silva_tax_level8 description String Taxonomic classification level 8 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level8 long_name String Silva Tax Level8
attribute silva_tax_level8 units String unitless
variable silva_tax_level9   String  
attribute silva_tax_level9 bcodmo_name String taxon
attribute silva_tax_level9 description String Taxonomic classification level 9 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level9 long_name String Silva Tax Level9
attribute silva_tax_level9 units String unitless
variable silva_tax_level10   String  
attribute silva_tax_level10 bcodmo_name String taxon
attribute silva_tax_level10 description String Taxonomic classification level 10 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level10 long_name String Silva Tax Level10
attribute silva_tax_level10 units String unitless
variable silva_tax_level11   String  
attribute silva_tax_level11 bcodmo_name String taxon
attribute silva_tax_level11 description String Taxonomic classification level 11 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level11 long_name String Silva Tax Level11
attribute silva_tax_level11 units String unitless
variable silva_tax_level12   String  
attribute silva_tax_level12 bcodmo_name String taxon
attribute silva_tax_level12 description String Taxonomic classification level 12 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level12 long_name String Silva Tax Level12
attribute silva_tax_level12 units String unitless
variable silva_tax_level13   String  
attribute silva_tax_level13 bcodmo_name String taxon
attribute silva_tax_level13 description String Taxonomic classification level 13 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level13 long_name String Silva Tax Level13
attribute silva_tax_level13 units String unitless
variable silva_tax_level14   String  
attribute silva_tax_level14 bcodmo_name String taxon
attribute silva_tax_level14 description String Taxonomic classification level 14 for each OTU; assigned by mothur based on the Silva database
attribute silva_tax_level14 long_name String Silva Tax Level14
attribute silva_tax_level14 units String unitless
variable assigned_habitat   String  
attribute assigned_habitat bcodmo_name String sample_descrip
attribute assigned_habitat description String Assigned community/habitat, based on both mothur classification and NCBI top hit
attribute assigned_habitat long_name String Assigned Habitat
attribute assigned_habitat units String unitless
variable NCBI_query_sequence_id   String  
attribute NCBI_query_sequence_id bcodmo_name String sequence
attribute NCBI_query_sequence_id description String Query sequence (BLAST qseqid); header description of representative sequence from fasta file
attribute NCBI_query_sequence_id long_name String NCBI Query Sequence Id
attribute NCBI_query_sequence_id units String unitless
variable NCBI_top_hit   String  
attribute NCBI_top_hit bcodmo_name String accession number
attribute NCBI_top_hit description String Subject sequence id (BLAST sseqid): sequence identifier for subject sequence from NCBI; Contains two NCBI accession numbers
attribute NCBI_top_hit long_name String NCBI Top Hit
attribute NCBI_top_hit units String unitless
variable NCBI_percent_identity   float  
attribute NCBI_percent_identity _FillValue float NaN
attribute NCBI_percent_identity actual_range float 78.25, 100.0
attribute NCBI_percent_identity bcodmo_name String unknown
attribute NCBI_percent_identity colorBarMaximum double 100.0
attribute NCBI_percent_identity colorBarMinimum double 0.0
attribute NCBI_percent_identity description String Percent identity (BLAST pident): percentage of identical matches in the alignment
attribute NCBI_percent_identity long_name String NCBI Percent Identity
attribute NCBI_percent_identity units String unitless
variable NCBI_percent_coverage   byte  
attribute NCBI_percent_coverage _FillValue byte 127
attribute NCBI_percent_coverage actual_range byte 15, 100
attribute NCBI_percent_coverage bcodmo_name String unknown
attribute NCBI_percent_coverage colorBarMaximum double 100.0
attribute NCBI_percent_coverage colorBarMinimum double 0.0
attribute NCBI_percent_coverage description String Percent coverage (BLAST qcovs): query coverage per sequence for all high-scoring segment pairs (HSPs)
attribute NCBI_percent_coverage long_name String NCBI Percent Coverage
attribute NCBI_percent_coverage units String unitless
variable NCBI_sequence_length   short  
attribute NCBI_sequence_length _FillValue short 32767
attribute NCBI_sequence_length actual_range short 56, 389
attribute NCBI_sequence_length bcodmo_name String unknown
attribute NCBI_sequence_length description String Alignment length (BLAST length)
attribute NCBI_sequence_length long_name String NCBI Sequence Length
attribute NCBI_sequence_length units String unitless
variable NCBI_mismatch   byte  
attribute NCBI_mismatch _FillValue byte 127
attribute NCBI_mismatch actual_range byte 0, 61
attribute NCBI_mismatch bcodmo_name String unknown
attribute NCBI_mismatch description String Number of mismatches (BLAST mismatch)
attribute NCBI_mismatch long_name String NCBI Mismatch
attribute NCBI_mismatch units String unitless
variable NCBI_evalue   double  
attribute NCBI_evalue _FillValue double NaN
attribute NCBI_evalue actual_range double 0.0, 6.0E180
attribute NCBI_evalue bcodmo_name String unknown
attribute NCBI_evalue description String Expectation value of match (BLAST evalue)
attribute NCBI_evalue long_name String NCBI Evalue
attribute NCBI_evalue units String unitless
variable NCBI_bitscore   float  
attribute NCBI_bitscore _FillValue float NaN
attribute NCBI_bitscore actual_range float 87.9, 710.0
attribute NCBI_bitscore bcodmo_name String unknown
attribute NCBI_bitscore description String Normalized alignment score for comparison across searches (BLAST bitscore)
attribute NCBI_bitscore long_name String NCBI Bitscore
attribute NCBI_bitscore units String unitless
variable NCBI_percent_positive   float  
attribute NCBI_percent_positive _FillValue float NaN
attribute NCBI_percent_positive actual_range float 78.25, 100.0
attribute NCBI_percent_positive bcodmo_name String unknown
attribute NCBI_percent_positive colorBarMaximum double 100.0
attribute NCBI_percent_positive colorBarMinimum double 0.0
attribute NCBI_percent_positive description String Percentage of positive-scoring matches (BLAST ppos)
attribute NCBI_percent_positive long_name String NCBI Percent Positive
attribute NCBI_percent_positive units String unitless
variable NCBI_top_hit_taxID   String  
attribute NCBI_top_hit_taxID bcodmo_name String unknown
attribute NCBI_top_hit_taxID description String Taxonomic identifiers (BLAST staxids): unique subject taxonomy ID(s); multiple IDs are separated by a semicolon
attribute NCBI_top_hit_taxID long_name String NCBI Top Hit Tax ID
attribute NCBI_top_hit_taxID units String unitless
variable NCBI_top_hit_title   String  
attribute NCBI_top_hit_title bcodmo_name String sample_descrip
attribute NCBI_top_hit_title description String Subject title from NCBI entry (BLAST stitle)
attribute NCBI_top_hit_title long_name String NCBI Top Hit Title
attribute NCBI_top_hit_title units String unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
ERDDAP, Version 2.02
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