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     data   graph     files  public Geolocation, abundance, and morphology data from Carrie Bow Caye in the Belizean Barrier Reef.    ?     I   M   background (external link) RSS BCO-DMO bcodmo_dataset_705432

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String We surveyed a 100 m wide by 300 m long transect of reef around Carrie Bow Cay
by SCUBA to map the distribution of
the\u00a0Aplysina\u00a0fistularis\u00a0and\u00a0Elacatinus\u00a0lori\u00a0populations.
GPS data were collected with a Garmin GPSMAP 76Cx unit in an underwater
housing made by Sound Ocean Systems. Waypoints are accurate within 5 m. At
each sponge, we recorded: depth at\u00a0base\u00a0of sponge (in meters, using
dive computers),\u00a0number\u00a0of tubes per sponge, length (nearest cm,
using a tape measure) and width (nearest cm, using a tape measure) of each
sponge tube. We also counted the number of fish per sponge, and categorized
fish into one of two life history stages: resident \u2265 18 mm standard
length (SL) or settler < 18 mm SL. Divers were trained to visually identify
settlers versus residents after measuring a subset of individuals with
calipers. We expect accuracy to be high, as this categorization was correlated
with a life history transition: settlers tend to live on the outside of
sponges, and residents live on the inside of sponges. Further details on
methods can be found in D\u2019Aloia et al. (2011),\u00a0Coral Reefs.
attribute NC_GLOBAL awards_0_award_nid String 544434
attribute NC_GLOBAL awards_0_award_number String OCE-1260424
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1260424 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String Dr David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Goby Data
P. Buston and C. D'Aloia, PIs
Version 14 June 2017
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.2d 13 Jun 2019
attribute NC_GLOBAL date_created String 2017-06-15T21:11:33Z
attribute NC_GLOBAL date_modified String 2019-03-27T20:33:22Z
attribute NC_GLOBAL defaultDataQuery String &time
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.705432.1
attribute NC_GLOBAL geospatial_vertical_max double 28.4
attribute NC_GLOBAL geospatial_vertical_min double 3.1
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/705432 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, data, dataset, date, day, depth, dmo, erddap, fish, Fish_1_0, fish_n, identifier, length, lunar, lunar_day, management, oceanography, office, pairs, pairs_1_0, preliminary, reef, reef_zone, residents, residents_1_0, residents_n, settlers, settlers_1_0, settlers_n, sponge, sponge_tubes, statistics, time, tube, tube_length, tube_width, tubes, waypoint, waypoint_ID, width, zone
attribute NC_GLOBAL license String The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/705432 (external link)
attribute NC_GLOBAL param_mapping String {'705432': {'depth': 'master - depth'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/705432/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String Boston University
attribute NC_GLOBAL people_0_affiliation_acronym String BU
attribute NC_GLOBAL people_0_person_name String Dr Peter Buston
attribute NC_GLOBAL people_0_person_nid String 544437
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_1_affiliation_acronym String WHOI
attribute NC_GLOBAL people_1_person_name String Dr Cassidy C. D'Aloia
attribute NC_GLOBAL people_1_person_nid String 704789
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String Boston University
attribute NC_GLOBAL people_2_affiliation_acronym String BU
attribute NC_GLOBAL people_2_person_name String Dr Peter Buston
attribute NC_GLOBAL people_2_person_nid String 544437
attribute NC_GLOBAL people_2_role String Contact
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Hannah Ake
attribute NC_GLOBAL people_3_person_nid String 650173
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String An Integrative Investigation of Population Connectivity Using a Coral Reef Fish
attribute NC_GLOBAL projects_0_acronym String Elacatinus Dispersal I
attribute NC_GLOBAL projects_0_description String Understanding the patterns, causes and consequences of larval dispersal is a major goal of 21st century marine ecology. Patterns of dispersal determine the rates of larval exchange, or connectivity, between populations. Both physical factors (e.g., water movement) and biological factors (e.g., larval behavior) cause variation in population connectivity. Population connectivity, in turn, has major consequences for all aspects of an organism's biology, from individual behavior to metapopulation dynamics, and from evolution within metapopulations to the origin and extinction of species. Further, understanding population connectivity is critical for the design of effective networks of marine reserves,�creation of�vital tools in conservation, and the development of sustainable fisheries.
Over the last decade, three methods, each of which tells something slightly different, have emerged as leading contenders to provide the greatest insights into population connectivity. First, coupled biophysical models make assumptions regarding water flow, larval behavior and ecology, to predict population connectivity. Second, indirect genetic methods use spatial distributions of allele frequencies to infer population connectivity. Third, direct genetic methods use parentage analyses, tracing recruits to specific adults, to measure population connectivity. Despite advances, lack of integration means that we do not know the predictive skill of biophysical models, or the extent to which patterns of dispersal predict spatial genetic structure. The overall objective of this proposal is to conduct an integrated investigation of population connectivity, using all three methods in one tractable system: the neon goby, Elacatinus lori, on the Belizean Barrier Reef. There are three motives for this choice of study system: i) fourteen highly polymorphic microsatellite loci have been developed, facilitating the assignment of recruits to parents using parentage analyses and the measurement of dispersal; ii) the physical oceanography of the Belizean Barrier Reef is well-studied, facilitating the development and testing of coupled biophysical models; and, iii) E. lori has a relatively small biogeographic range, facilitating analysis of the spatial distribution of allele frequencies throughout its range.
Broader Impacts. The grant will support one postdoc and two graduate students who will be trained in scientific diving, marine fieldwork, population genetics, biophysical modeling, and mathematical modeling, and will gain collaborative research experience. PIs will incorporate research findings in their courses, which cover all these topics. The grant will also broaden participation of under-represented groups by supporting six undergraduates from groups traditionally underrepresented in STEM fields. In each year of the project there will be an All Participants meeting to reinforce the network of participants. A project website will be developed, in English and Spanish, on the theme of larval dispersal and population connectivity. This will include a resource for K-12 marine science educators developed in collaboration with a marine science educator. All PIs will ensure that results are broadly disseminated to the scientific community and general public via appropriate forms of media.
attribute NC_GLOBAL projects_0_end_date String 2017-02
attribute NC_GLOBAL projects_0_geolocation String Belizean Barrier Reef System (16.803 degrees North 88.096 degrees West)
attribute NC_GLOBAL projects_0_name String An Integrative Investigation of Population Connectivity Using a Coral Reef Fish
attribute NC_GLOBAL projects_0_project_nid String 544435
attribute NC_GLOBAL projects_0_project_website String http://people.bu.edu/buston/lab/Welcome.html (external link)
attribute NC_GLOBAL projects_0_start_date String 2013-03
attribute NC_GLOBAL publisher_name String Hannah Ake
attribute NC_GLOBAL publisher_role String BCO-DMO Data Manager(s)
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v29
attribute NC_GLOBAL summary String Geolocation, abundance, and morphology data from Carrie Bow Caye in the Belizean Barrier Reef.
attribute NC_GLOBAL title String Geolocation, abundance, and morphology data from Carrie Bow Caye in the Belizean Barrier Reef.
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.5-beta
variable reef_zone   String  
attribute reef_zone description String Description of the reef zone where sample was taken
attribute reef_zone ioos_category String Unknown
attribute reef_zone long_name String Reef Zone
attribute reef_zone units String unitless
variable date   String  
attribute date description String Date sample was taken; YYYY/MM/DD
attribute date ioos_category String Time
attribute date long_name String Date
attribute date source_name String date
attribute date units String unitless
variable lunar_day   byte  
attribute lunar_day _FillValue byte 127
attribute lunar_day actual_range byte 1, 29
attribute lunar_day description String Lunar day sample was taken
attribute lunar_day ioos_category String Time
attribute lunar_day long_name String Lunar Day
attribute lunar_day units String unitless
variable waypoint_ID   short  
attribute waypoint_ID _FillValue short 32767
attribute waypoint_ID actual_range short 92, 795
attribute waypoint_ID description String PI issued location ID; Each sponge is at a different location
attribute waypoint_ID ioos_category String Identifier
attribute waypoint_ID long_name String Waypoint ID
attribute waypoint_ID units String unitless
variable depth   double  
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth _FillValue double NaN
attribute depth actual_range double 3.1, 28.4
attribute depth axis String Z
attribute depth colorBarMaximum double 8000.0
attribute depth colorBarMinimum double -8000.0
attribute depth colorBarPalette String TopographyDepth
attribute depth description String Depth at the base of the sponge
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable sponge_tubes   byte  
attribute sponge_tubes _FillValue byte 127
attribute sponge_tubes actual_range byte 1, 8
attribute sponge_tubes description String Number of tubes per sponge
attribute sponge_tubes ioos_category String Unknown
attribute sponge_tubes long_name String Sponge Tubes
attribute sponge_tubes units String count
variable Fish_1_0   byte  
attribute Fish_1_0 _FillValue byte 127
attribute Fish_1_0 actual_range byte 0, 1
attribute Fish_1_0 description String Fish are (1) present or (0) absent from the sponge
attribute Fish_1_0 ioos_category String Unknown
attribute Fish_1_0 long_name String Fish 1 0
attribute Fish_1_0 units String unitless
variable fish_n   byte  
attribute fish_n _FillValue byte 127
attribute fish_n actual_range byte 0, 6
attribute fish_n description String Number of fish per sponge
attribute fish_n ioos_category String Statistics
attribute fish_n long_name String Fish N
attribute fish_n units String count
variable residents_1_0   byte  
attribute residents_1_0 _FillValue byte 127
attribute residents_1_0 actual_range byte 0, 1
attribute residents_1_0 description String Residents are (1) present or (0) absent from the sponge
attribute residents_1_0 ioos_category String Unknown
attribute residents_1_0 long_name String Residents 1 0
attribute residents_1_0 units String unitless
variable residents_n   byte  
attribute residents_n _FillValue byte 127
attribute residents_n actual_range byte 0, 5
attribute residents_n description String Number of residents per sponge
attribute residents_n ioos_category String Statistics
attribute residents_n long_name String Residents N
attribute residents_n units String count
variable settlers_1_0   byte  
attribute settlers_1_0 _FillValue byte 127
attribute settlers_1_0 actual_range byte 0, 1
attribute settlers_1_0 description String Settlers are (1) present or (0) absent from the sponge
attribute settlers_1_0 ioos_category String Unknown
attribute settlers_1_0 long_name String Settlers 1 0
attribute settlers_1_0 units String unitless
variable settlers_n   byte  
attribute settlers_n _FillValue byte 127
attribute settlers_n actual_range byte 0, 2
attribute settlers_n description String Number of settlers per sponge
attribute settlers_n ioos_category String Statistics
attribute settlers_n long_name String Settlers N
attribute settlers_n units String count
variable pairs_1_0   byte  
attribute pairs_1_0 _FillValue byte 127
attribute pairs_1_0 actual_range byte 0, 1
attribute pairs_1_0 description String Pairs are (1) present or (0) absent from the sponge
attribute pairs_1_0 ioos_category String Unknown
attribute pairs_1_0 long_name String Pairs 1 0
attribute pairs_1_0 units String unitless
variable tube_length   byte  
attribute tube_length _FillValue byte 127
attribute tube_length actual_range byte 1, 96
attribute tube_length description String Length of the sponge tube
attribute tube_length ioos_category String Unknown
attribute tube_length long_name String Tube Length
attribute tube_length units String centimeters
variable tube_width   byte  
attribute tube_width _FillValue byte 127
attribute tube_width actual_range byte 1, 14
attribute tube_width description String Widthe of the sponge tube
attribute tube_width ioos_category String Unknown
attribute tube_width long_name String Tube Width
attribute tube_width units String centimeters

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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