ERDDAP > info > bcodmo_dataset_712803

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Halomethane concentrations in cell culture] - Halomethane concentrations in cell culture (The role of organic and metal cofactors on the biogenic synthesis of halogenated volatile hydrocarbons)		I   M	background			BCO-DMO	bcodmo_dataset_712803

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	Peak Simple model 302 Integration using Peak 393 software Excel 2016
attribute	NC_GLOBAL	awards_0_award_nid	String	712781
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1559276
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1559276
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Dr Simone Metz
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	51479
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Halomethane concentrations in cell culture PI: Sergio Sanudo-Wilhelmy (USC) Version: 2017-08-14
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2017-08-14T22:26:06Z
attribute	NC_GLOBAL	date_modified	String	2019-06-26T18:01:04Z
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.712803.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/712803
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	Gas Chromatograph
attribute	NC_GLOBAL	instruments_0_dataset_instrument_description	String	Column- Restek Rtx-502.2 (60m, 0.32mm ID, 1.8µm df)
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	712806
attribute	NC_GLOBAL	instruments_0_description	String	Instrument separating gases, volatile substances, or substances dissolved in a volatile solvent by transporting an inert gas through a column packed with a sorbent to a detector for assay. (from SeaDataNet, BODC)
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/LAB02/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Gas Chromatograph
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	661
attribute	NC_GLOBAL	instruments_0_supplied_name	String	Agilent 7890A Gas Chromatograph with electron capture detector
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, biological, cells, cells_per_ml, ch3, CH3Br, CH3Cl, CH3I, chbr3, chemical, clade, data, dataset, dmo, elapsed, erddap, hours, management, oceanography, office, per, preliminary, species, strain, time, Time_elapsed_hours
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/712803/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/712803
attribute	NC_GLOBAL	param_mapping	String	{'712803': {}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/712803/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_0_person_name	String	Sergio A. Sanudo-Wilhelmy
attribute	NC_GLOBAL	people_0_person_nid	String	51586
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	University of Southern California
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	USC
attribute	NC_GLOBAL	people_1_person_name	String	Lynda Cutter
attribute	NC_GLOBAL	people_1_person_nid	String	516958
attribute	NC_GLOBAL	people_1_role	String	Contact
attribute	NC_GLOBAL	people_1_role_type	String	related
attribute	NC_GLOBAL	people_2_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_2_person_name	String	Megan Switzer
attribute	NC_GLOBAL	people_2_person_nid	String	708683
attribute	NC_GLOBAL	people_2_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_2_role_type	String	related
attribute	NC_GLOBAL	project	String	Volatile_Hydrocarbons
attribute	NC_GLOBAL	projects_0_acronym	String	Volatile_Hydrocarbons
attribute	NC_GLOBAL	projects_0_description	String	NSF Award Abstract: Volatile halogenated hydrocarbon gases, in this case halomethanes, are produced naturally by organisms in the ocean; which then serves as a source of these biogenic gases to the atmosphere. Their chemical reactions in the atmosphere are very similar to those of anthropogenic chlorofluorocarbons (CFCs). While CFCs are well-studied because they consume the ozone in the upper atmosphere that shields the earth from harmful ultraviolet radiation, halomethanes have been largely neglected, even though they currently account for 25% of the ozone depletion. As anthropogenic CFC levels steadily decline, however, halomethanes are predicted to account for 50% of ozone depletion by 2050. Based on limited study thus far, marine halomethane production has been ascribed mainly to phytoplankton and macro algae. This project will build on new and compelling data that suggests marine heterotrophic bacteria could also be major producers of halomethanes. The data produced here will provide the critical evaluation required to address discrepancies in global halomethane budgets which currently are out of balance due to an unknown source to the atmosphere, evaluating the hypothesis that marine heterotrophic bacteria can supply this missing source. Concerns over the stability of the earth's stratospheric ozone layer make this valuable and necessary research with added value of providing support for engaged undergraduate, graduate, and postdoctoral education at the University of Southern California. Past research on the production of marine halomethanes has focused on phytoplankton and macro algae, while potential bacterial contributions to the processe have been neglected. This research proposes to study the role of marine heterotrophic bacteria on the production of halomethanes. It has been noted in past studies that there are discrepancies in the global atmospheric halomethane budget, and it is possible this is due to a large missing bacterial source. Additionally, this research will evaluate the potential importance of vitamin B12, methionine, and vanadium cofactors on the synthesis of halomethanes in bacteria. A large portion of marine bacteria cannot synthesize methylation co-enzymes, and therefore, would require available B12, methionine, and vanadium from external sources to complete the methylation step. This study will also measure concentrations of halomethanes, B12, methionine, and vanadium in upwelling regions as well as at a long-term time series site in order to put constraints on the variability of halomethanes concentrations for use in global linked air-sea models.
attribute	NC_GLOBAL	projects_0_end_date	String	2019-03
attribute	NC_GLOBAL	projects_0_name	String	The role of organic and metal cofactors on the biogenic synthesis of halogenated volatile hydrocarbons
attribute	NC_GLOBAL	projects_0_project_nid	String	712782
attribute	NC_GLOBAL	projects_0_start_date	String	2016-04
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Halomethane concentrations in cell culture
attribute	NC_GLOBAL	title	String	[Halomethane concentrations in cell culture] - Halomethane concentrations in cell culture (The role of organic and metal cofactors on the biogenic synthesis of halogenated volatile hydrocarbons)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	Strain		String
attribute	Strain	bcodmo_name	String	unknown
attribute	Strain	description	String	Strain of marine bacteria
attribute	Strain	long_name	String	Strain
attribute	Strain	units	String	unitless
variable	Species		String
attribute	Species	bcodmo_name	String	unknown
attribute	Species	description	String	Species
attribute	Species	long_name	String	Species
attribute	Species	units	String	unitless
variable	Clade		String
attribute	Clade	bcodmo_name	String	unknown
attribute	Clade	description	String	Clade
attribute	Clade	long_name	String	Clade
attribute	Clade	units	String	unitless
variable	Time_elapsed_hours		short
attribute	Time_elapsed_hours	_FillValue	short	32767
attribute	Time_elapsed_hours	actual_range	short	0, 2400
attribute	Time_elapsed_hours	bcodmo_name	String	time_elapsed
attribute	Time_elapsed_hours	description	String	Incubation duration; originally Time (hours)
attribute	Time_elapsed_hours	long_name	String	Time Elapsed Hours
attribute	Time_elapsed_hours	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P01/current/ELTMZZZZ/
attribute	Time_elapsed_hours	units	String	hours
variable	cells_per_ml		int
attribute	cells_per_ml	_FillValue	int	2147483647
attribute	cells_per_ml	actual_range	int	233000, 1110000000
attribute	cells_per_ml	bcodmo_name	String	cell_concentration
attribute	cells_per_ml	description	String	Cell concentration; originally cellsmL-1
attribute	cells_per_ml	long_name	String	Cells Per Ml
attribute	cells_per_ml	units	String	cells per milliliter
variable	CH3Br		float
attribute	CH3Br	_FillValue	float	NaN
attribute	CH3Br	actual_range	float	0.2, 3673.2
attribute	CH3Br	bcodmo_name	String	unknown
attribute	CH3Br	description	String	bromomethane concentration
attribute	CH3Br	long_name	String	CH3 BR
attribute	CH3Br	units	String	picomoles per liter
variable	CH3I		float
attribute	CH3I	_FillValue	float	NaN
attribute	CH3I	actual_range	float	1.28, 16311.96
attribute	CH3I	bcodmo_name	String	unknown
attribute	CH3I	description	String	iodomethane concentration
attribute	CH3I	long_name	String	CH3 I
attribute	CH3I	units	String	picomoles per liter
variable	CH3Cl		float
attribute	CH3Cl	_FillValue	float	NaN
attribute	CH3Cl	actual_range	float	0.67, 3067.47
attribute	CH3Cl	bcodmo_name	String	unknown
attribute	CH3Cl	description	String	chloromethane concentration
attribute	CH3Cl	long_name	String	CH3 CL
attribute	CH3Cl	units	String	picomoles per liter
variable	CHBr3		String
attribute	CHBr3	bcodmo_name	String	unknown
attribute	CHBr3	description	String	bromoform, tribromomethane concentration
attribute	CHBr3	long_name	String	CHBR3
attribute	CHBr3	units	String	picomoles per liter

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.