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   set  data   graph     files  public Number of gene markers identified in sediment in samples from Little Lagoon, Alabama
collected from 2012-2013.
   ?         M   background (external link) RSS Subscribe BCO-DMO bcodmo_dataset_723948

The Dataset's Variables and Attributes

Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String Little Lagoon is a shallow coastal lagoon that is tidally connected to the
Gulf of Mexico but has no riverine inputs. The water in the lagoon is
replenished solely from precipitation and groundwater inputs primarily on the
East end (Su et al. 2012). Because of the rapid development in Baldwin County,
a large amount of NO3- enters the Little Lagoon system through SGD (Murgulet &
Tick 2008). In this region, there can be rapid changes in the depth to
groundwater (Fig. 4.1 inset) and episodic SGD inputs to the lagoon (Su et
al.2013). Within the lagoon, three sites were selected (East, Mouth, and West)
to represent the gradient that exists across the lagoon from the input of
groundwater. Sites were sampled on a near-monthly basis from February 2012 to
February 2013.

Additional methodology can be found in:

Bernard, Rebecca & Mortazavi, Behzad & A. Kleinhuizen, Alice. (2015).
Dissimilatory nitrate reduction to ammonium (DNRA) seasonally dominates
NO3\u2212 reduction pathways in an anthropogenically impacted sub-tropical
coastal lagoon. Biogeochemistry. 125.
47-64.\u00a0[10.1007/s10533-015-0111-6](\\"https://link.springer.com/article/10.1007%2Fs10533-015-0111-6\\").\u00a0
attribute NC_GLOBAL awards_0_award_nid String 497637
attribute NC_GLOBAL awards_0_award_number String OCE-0962008
attribute NC_GLOBAL awards_0_data_url String http://nsf.gov/awardsearch/showAward?AWD_ID=0962008 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Gene Copies
B. Mortazavi and W. Burnett, PIs
Version 16 January 2018
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3 19 Dec 2019
attribute NC_GLOBAL date_created String 2018-01-17T20:10:58Z
attribute NC_GLOBAL date_modified String 2019-03-15T18:54:30Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.723948.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/723948 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, data, dataset, date, description, dmo, east, East_SE, erddap, management, mouth, Mouth_SE, oceanography, office, preliminary, value, Value_Description, west, West_SE, year
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/723948/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/723948 (external link)
attribute NC_GLOBAL param_mapping String {'723948': {}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/723948/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String National Science Foundation
attribute NC_GLOBAL people_0_affiliation_acronym String NSF-DEB
attribute NC_GLOBAL people_0_person_name String Dr Behzad Mortazavi
attribute NC_GLOBAL people_0_person_nid String 491316
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String Florida State University
attribute NC_GLOBAL people_1_affiliation_acronym String FSU - EOAS
attribute NC_GLOBAL people_1_person_name String Dr William C. Burnett
attribute NC_GLOBAL people_1_person_nid String 491315
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String National Science Foundation
attribute NC_GLOBAL people_2_affiliation_acronym String NSF-DEB
attribute NC_GLOBAL people_2_person_name String Dr Behzad Mortazavi
attribute NC_GLOBAL people_2_person_nid String 491316
attribute NC_GLOBAL people_2_role String Contact
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Hannah Ake
attribute NC_GLOBAL people_3_person_nid String 650173
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String LittleLagoonGroundwater
attribute NC_GLOBAL projects_0_acronym String LittleLagoonGroundwater
attribute NC_GLOBAL projects_0_description String This project investigated the link between submarine groundwater discharge (SGD) and microalgal dynamics in Little Lagoon, Alabama.  In contrast to most near-shore environments, it is fully accessible; has no riverine inputs; and is large enough to display ecological diversity (c. 14x 0.75 km) yet small enough to be comprehensively sampled on appropriate temporal and spatial scales. The PIs have previously demonstrated that the lagoon is a hot-spot for toxic blooms of the diatom Pseudo-nitzchia spp. that are correlated with discharge from the surficial aquifer. This project assessed variability in SGD, the dependence of benthic nutrient fluxes on microphytobenthos (MPB) abundance and productivity, and the response of the phytoplankton to nutrient enrichment and dilution. The work integrated multiple temporal and spatial scales and demonstrated both the relative importance of SGD vs. benthic recycling as a source of nutrients, and the role of SGD in structuring the microalgal community. (paraphrased from Award abstract)
attribute NC_GLOBAL projects_0_end_date String 2014-08
attribute NC_GLOBAL projects_0_geolocation String southern Alabama, east of Mobile
attribute NC_GLOBAL projects_0_name String Groundwater Discharge, Benthic Coupling and Microalgal Community Structure in a Shallow Coastal Lagoon
attribute NC_GLOBAL projects_0_project_nid String 491318
attribute NC_GLOBAL projects_0_start_date String 2010-03
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL subsetVariables String Year
attribute NC_GLOBAL summary String Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013.
attribute NC_GLOBAL title String Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013.
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable Year   byte  
attribute Year _FillValue byte 127
attribute Year actual_range byte 1, 1
attribute Year bcodmo_name String unknown
attribute Year description String Year ID that samples were taken
attribute Year long_name String Year
attribute Year units String unitless
variable Date   String  
attribute Date bcodmo_name String date
attribute Date description String Month and day that samples were taken; MMM-DD
attribute Date long_name String Date
attribute Date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute Date units String unitless
variable Value_Description   String  
attribute Value_Description bcodmo_name String unknown
attribute Value_Description description String Description of the measurment taken; description includes relevant units for each sample taken. Descriptions include: bac amoA = gene marker for nitrification; nirK = gene marker for denitrification; nirS = gene marker for denitrification; nrfA = gene marker for dissimilatory nitrate reduction ot ammonium; dsrB = gene marker for sulfate reduction; nifH = gene marker for N2 fixation
attribute Value_Description long_name String Value Description
attribute Value_Description units String unitless
variable Mouth   int  
attribute Mouth _FillValue int 2147483647
attribute Mouth actual_range int 1014, 56540000
attribute Mouth bcodmo_name String genetic_conc
attribute Mouth description String Number of gene markers identified in sediment at the site Mouth; location of site is 30.243683, -87.738407
attribute Mouth long_name String Mouth
attribute Mouth units String g-1 sediment
variable Mouth_SE   int  
attribute Mouth_SE _FillValue int 2147483647
attribute Mouth_SE actual_range int 273, 11059525
attribute Mouth_SE bcodmo_name String genetic_conc
attribute Mouth_SE description String Standard error for gene markers identified in sediment
attribute Mouth_SE long_name String Mouth SE
attribute Mouth_SE units String g-1 sediment
variable East   int  
attribute East _FillValue int 2147483647
attribute East actual_range int 0, 561040
attribute East bcodmo_name String genetic_conc
attribute East description String Number of gene markers identified in sediment at the site East; location of site is 30.253347, -87.724729
attribute East long_name String East
attribute East units String g-1 sediment
variable East_SE   int  
attribute East_SE _FillValue int 2147483647
attribute East_SE actual_range int 0, 381281
attribute East_SE bcodmo_name String genetic_conc
attribute East_SE description String Standard error for gene markers identified in sediment
attribute East_SE long_name String East SE
attribute East_SE units String g-1 sediment
variable West   int  
attribute West _FillValue int 2147483647
attribute West actual_range int 1552, 53560000
attribute West bcodmo_name String genetic_conc
attribute West description String Number of gene markers identified in sediment at the site West; location of site is 30.247181, -87.767856
attribute West long_name String West
attribute West units String g-1 sediment
variable West_SE   int  
attribute West_SE _FillValue int 2147483647
attribute West_SE actual_range int 325, 9699134
attribute West_SE bcodmo_name String genetic_conc
attribute West_SE description String Standard error for gene markers identified in sediment
attribute West_SE long_name String West SE
attribute West_SE units String g-1 sediment

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.


 
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