ERDDAP > info > bcodmo_dataset_764664

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Log_Kd] - Partition coefficient of 234Th, 233Pa, 210Pb, 210Po, and 7Be (Biopolymers as carrier phases for selected natural radionuclides (of Th, Pa, Pb, Po, Be) in diatoms and coccolithophores)		I   M	background			BCO-DMO	bcodmo_dataset_764664

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	access_formats	String	.htmlTable,.csv,.json,.mat,.nc,.tsv
attribute	NC_GLOBAL	acquisition_description	String	\u00a0 Partition coefficient of 234Th, 233Pa, 210Pb, 210Po, and 7Be Activity concentrations of 234Th, 233Pa, 210Pb, 210Po, and 7Be were measured by gamma counting the 63.5, 312, 46.5, and 477.6 keV lines, respectively, on a Canberra ultra-highpurity germanium well-type detector. The 210Po activity was analyzed by liquid scintillation counting (Beckman Model 8100 Liquid Scintillation Counter). The filter samples (> 0.2 um particulate phase) were soaked with 1 mol L-1 HCl for 20 min in a counting vial, and the filtrate samples (< 0.2 um dissolved phase) were transferred into counting vials directly. Both filter and filtrate samples were then counted for activities of each radionuclide. All reported activities were decay and geometry corrected. 233Pa was added in equilibrium with 237Np. Under a wide range of environmental conditions, aqueous neptunium speciation is believed to be dominated by the pentavalent cation NpO2+. Np(V) is relative soluble and tends to remain in the water phase, unlike other actinides, such as Pu and Am, which are readily adsorbed by particles in the environment (Atwood 2013). In our absorption experiments, 237Np activities could be found only in the dissolved phase for all samples, supporting the assumption that 237Np would not adsorb onto particles during the time for which decay and in-growth corrections of 233Pa were applied. Traditional partition coefficients (Kd) between dissolved and particulate phases were used to quantify the sorption of radionuclides onto different particles in different experimental systems. Kd was defined here as Kd = Ap x (Ad x Cp)^-1\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0(1) where Ap and Ad represent particulate and dissolved activities (Bq L-1) of radionuclides and Cp is the particle concentration (kg L-1; Honeyman and Santschi 1989; Guo and Santschi 1997).
attribute	NC_GLOBAL	awards_0_award_nid	String	735995
attribute	NC_GLOBAL	awards_0_award_number	String	OCE-1356453
attribute	NC_GLOBAL	awards_0_data_url	String	http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1356453
attribute	NC_GLOBAL	awards_0_funder_name	String	NSF Division of Ocean Sciences
attribute	NC_GLOBAL	awards_0_funding_acronym	String	NSF OCE
attribute	NC_GLOBAL	awards_0_funding_source_nid	String	355
attribute	NC_GLOBAL	awards_0_program_manager	String	Henrietta N Edmonds
attribute	NC_GLOBAL	awards_0_program_manager_nid	String	51517
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	comment	String	Partition coefficient of 234Th, 233Pa, 210Pb, 210Po, and 7Be PI: Peter H. Santschi Version: 2019-04-10
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_type	String	institution
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	data_source	String	extract_data_as_tsv version 2.3 19 Dec 2019
attribute	NC_GLOBAL	date_created	String	2019-04-10T17:32:05Z
attribute	NC_GLOBAL	date_modified	String	2019-04-11T20:01:18Z
attribute	NC_GLOBAL	defaultDataQuery	String	&amp;time&lt;now
attribute	NC_GLOBAL	doi	String	10.1575/1912/bco-dmo.764664.1
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/764664
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	instruments_0_acronym	String	LSC
attribute	NC_GLOBAL	instruments_0_dataset_instrument_description	String	The 210Po activity was analyzed by liquid scintillation counting (Beckman Model 8100 Liquid Scintillation Counter).
attribute	NC_GLOBAL	instruments_0_dataset_instrument_nid	String	764686
attribute	NC_GLOBAL	instruments_0_description	String	Liquid scintillation counting is an analytical technique which is defined by the incorporation of the radiolabeled analyte into uniform distribution with a liquid chemical medium capable of converting the kinetic energy of nuclear emissions into light energy. Although the liquid scintillation counter is a sophisticated laboratory counting system used the quantify the activity of particulate emitting (ß and a) radioactive samples, it can also detect the auger electrons emitted from 51Cr and 125I samples.
attribute	NC_GLOBAL	instruments_0_instrument_external_identifier	String	https://vocab.nerc.ac.uk/collection/L05/current/LAB21/
attribute	NC_GLOBAL	instruments_0_instrument_name	String	Liquid Scintillation Counter
attribute	NC_GLOBAL	instruments_0_instrument_nid	String	624
attribute	NC_GLOBAL	instruments_0_supplied_name	String	Beckman Model 8100 Liquid Scintillation Counter
attribute	NC_GLOBAL	instruments_1_dataset_instrument_description	String	For IEF (isoelectric focusing electrophoresis), a Pharmacia Biotech Multiphor II with a EPS3500 XL power supply was used.
attribute	NC_GLOBAL	instruments_1_dataset_instrument_nid	String	764672
attribute	NC_GLOBAL	instruments_1_description	String	General term for an apparatus used in clinical and research laboratories to separate charged colloidal particles (or molecules) of varying size through a medium by applying an electric field.
attribute	NC_GLOBAL	instruments_1_instrument_name	String	Electrophoresis Chamber
attribute	NC_GLOBAL	instruments_1_instrument_nid	String	471592
attribute	NC_GLOBAL	instruments_1_supplied_name	String	Pharmacia Biotech Multiphor II
attribute	NC_GLOBAL	instruments_2_dataset_instrument_description	String	Activity concentrations of 234Th, 233Pa, 210Pb, 210Po, and 7Be were measured by gamma counting the 63.5, 312, 46.5, and 477.6 keV lines, respectively, on a Canberra ultra-highpurity germanium well-type detector.
attribute	NC_GLOBAL	instruments_2_dataset_instrument_nid	String	764687
attribute	NC_GLOBAL	instruments_2_description	String	Instruments measuring the relative levels of electromagnetic radiation of different wavelengths in the gamma-ray waveband.
attribute	NC_GLOBAL	instruments_2_instrument_name	String	Gamma Ray Spectrometer
attribute	NC_GLOBAL	instruments_2_instrument_nid	String	670659
attribute	NC_GLOBAL	instruments_2_supplied_name	String	Canberra ultra-highpurity germanium well-type detector
attribute	NC_GLOBAL	keywords	String	bco, bco-dmo, Be_sd, biological, chemical, data, dataset, dmo, erddap, management, oceanography, office, Pa_sd, particle, Particle_type, Pb_sd, Po_sd, preliminary, Th_sd, type
attribute	NC_GLOBAL	license	String	https://www.bco-dmo.org/dataset/764664/license
attribute	NC_GLOBAL	metadata_source	String	https://www.bco-dmo.org/api/dataset/764664
attribute	NC_GLOBAL	param_mapping	String	{'764664': {}}
attribute	NC_GLOBAL	parameter_source	String	https://www.bco-dmo.org/mapserver/dataset/764664/parameters
attribute	NC_GLOBAL	people_0_affiliation	String	Texas A&M, Galveston
attribute	NC_GLOBAL	people_0_affiliation_acronym	String	TAMUG
attribute	NC_GLOBAL	people_0_person_name	String	Peter Santschi
attribute	NC_GLOBAL	people_0_person_nid	String	735998
attribute	NC_GLOBAL	people_0_role	String	Principal Investigator
attribute	NC_GLOBAL	people_0_role_type	String	originator
attribute	NC_GLOBAL	people_1_affiliation	String	Texas A&M, Galveston
attribute	NC_GLOBAL	people_1_affiliation_acronym	String	TAMUG
attribute	NC_GLOBAL	people_1_person_name	String	Antonietta Quigg
attribute	NC_GLOBAL	people_1_person_nid	String	736000
attribute	NC_GLOBAL	people_1_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_1_role_type	String	originator
attribute	NC_GLOBAL	people_2_affiliation	String	Texas A&M, Galveston
attribute	NC_GLOBAL	people_2_affiliation_acronym	String	TAMUG
attribute	NC_GLOBAL	people_2_person_name	String	Kathleen Schwehr
attribute	NC_GLOBAL	people_2_person_nid	String	736002
attribute	NC_GLOBAL	people_2_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_2_role_type	String	originator
attribute	NC_GLOBAL	people_3_affiliation	String	Texas A&M, Galveston
attribute	NC_GLOBAL	people_3_affiliation_acronym	String	TAMUG
attribute	NC_GLOBAL	people_3_person_name	String	Chen Xu
attribute	NC_GLOBAL	people_3_person_nid	String	736004
attribute	NC_GLOBAL	people_3_role	String	Co-Principal Investigator
attribute	NC_GLOBAL	people_3_role_type	String	originator
attribute	NC_GLOBAL	people_4_affiliation	String	Woods Hole Oceanographic Institution
attribute	NC_GLOBAL	people_4_affiliation_acronym	String	WHOI BCO-DMO
attribute	NC_GLOBAL	people_4_person_name	String	Mathew Biddle
attribute	NC_GLOBAL	people_4_person_nid	String	708682
attribute	NC_GLOBAL	people_4_role	String	BCO-DMO Data Manager
attribute	NC_GLOBAL	people_4_role_type	String	related
attribute	NC_GLOBAL	project	String	Biopolymers for radionuclides
attribute	NC_GLOBAL	projects_0_acronym	String	Biopolymers for radionuclides
attribute	NC_GLOBAL	projects_0_description	String	NSF Award Abstract: Particle-associated natural radioisotopes are transported to the ocean floor mostly via silica and carbonate ballasted particles, allowing their use as tracers for particle transport. Th(IV), Pa (IV,V), Po(IV), Pb(II) and Be(II) radionuclides are important proxies in oceanographic investigations, used for tracing particle and colloid cycling, estimating export fluxes of particulate organic carbon, tracing air-sea exchange, paleoproductivity, and/or ocean circulation in paleoceanographic studies. Even though tracer approaches are considered routine, there are cases where data interpretation or validity has become controversial, largely due to uncertainties about inorganic proxies and organic carrier molecules. Recent studies showed that cleaned diatom frustules and pure silica particles, sorb natural radionuclides to a much lower extent (by 1-2 orders of magnitude) than whole diatom cells (with or without shells). Phytoplankton that build siliceous or calcareous shells, such as the diatoms and coccolithophores, are assembled via bio-mineralization processes using biopolymers as nanoscale templates. These templates could serve as possible carriers for radionuclides and stable metals. In this project, a research team at the Texas A & M University at Galveston hypothesize that radionuclide sorption is controlled by selective biopolymers that are associated with biogenic opal (diatoms), CaCO3 (coccolithophores) and the attached exopolymeric substances (EPS), rather than to pure mineral phase. To pursue this idea, the major objectives of their research will include separation, identification and molecular-level characterization of the individual biopolymers (e.g., polysaccharides, uronic acids, proteins, hydroquinones, hydroxamate siderophores, etc.) that are responsible for binding different radionuclides (Th, Pa, Pb, Po and Be) attached to cells or in the matrix of biogenic opal or CaCO3 as well as attached EPS mixture, in laboratory grown diatom and coccolithophore cultures. Laboratory-scale radiolabeling experiments will be conducted, and different separation techniques and characterization techniques will be applied. Intellectual Merit : It is expected that this study will help elucidate the molecular basis of the templated growth of diatoms and coccoliths, EPS and their role in scavenging natural radionuclides in the ocean, and help resolve debates on the oceanographic tracer applications of different natural radioisotopes (230,234Th, 231Pa, 210Po, 210Pb and 7,10Be). The proposed interdisciplinary research project will require instrumental approaches for molecular-level characterization of these radionuclides associated carrier molecules. Broader Impacts: The results of this study will be relevant for understanding biologically mediated ocean scavenging of radionuclides by diatoms and coccoliths which is important for carbon cycling in the ocean, and will contribute to improved interpretation of data obtained by field studies especially through the GEOTRACES program. This new program will enhance training programs at TAMUG for postdocs, graduate and undergraduate students. Lastly, results will be integrated in college courses and out-reach activities at Texas A&M University, including NSF-REU, Sea Camp, Elder Hostel and exhibits at the local science fair and interaction with its after-school program engaging Grade 9-12 students from groups traditionally underrepresented.
attribute	NC_GLOBAL	projects_0_end_date	String	2018-02
attribute	NC_GLOBAL	projects_0_name	String	Biopolymers as carrier phases for selected natural radionuclides (of Th, Pa, Pb, Po, Be) in diatoms and coccolithophores
attribute	NC_GLOBAL	projects_0_project_nid	String	735996
attribute	NC_GLOBAL	projects_0_start_date	String	2014-03
attribute	NC_GLOBAL	publisher_name	String	Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute	NC_GLOBAL	publisher_type	String	institution
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	standard_name_vocabulary	String	CF Standard Name Table v55
attribute	NC_GLOBAL	summary	String	Laboratory studies were conducted to examine the sorption of selected radionuclides (234Th, 233Pa, 210Po, 210Pb, and 7Be) onto inorganic (pure silica and acid-cleaned diatom frustules) and organic (diatom cells with or without silica frustules) particles in natural seawater and the role of templating biomolecules and exopolymeric substances (EPS) extracted from the same species of diatom, Phaeodactylum tricornutum, in the sorption process. The range of partition coefficients (Kd, reported as logKd) of radionuclides between water and the different particle types was 4.78\u20136.69 for 234Th, 5.23\u20136.71 for 233Pa, 4.44\u20135.86 for 210Pb, 4.47\u20134.92 for 210Po, and 4.93\u20137.23 for 7Be, similar to values reported for lab and field determinations. The sorption of all radionuclides was significantly enhanced in the presence of organic matter associated with particles, resulting in Kd one to two orders of magnitude higher than for inorganic particles only, with highest values for 7Be (logKd of 7.2). Results further indicate that EPS and frustule-embedded biomolecules in diatom cells are responsible for the sorption enhancement rather than the silica shell itself. By separating radiolabeled EPS via isoelectric focusing, we found that isoelectric points are radionuclide specific, suggesting that each radionuclide binds to specific biopolymeric functional groups, with the most efficient binding sites likely occurring in acid polysaccharides, iron hydroxides, and proteins. Further progress in evaluating the effects of diatom frustule\u2013related biopolymers on binding, scavenging, and fractionation of radionuclides would require the application of molecular-level characterization techniques.
attribute	NC_GLOBAL	title	String	[Log_Kd] - Partition coefficient of 234Th, 233Pa, 210Pb, 210Po, and 7Be (Biopolymers as carrier phases for selected natural radionuclides (of Th, Pa, Pb, Po, Be) in diatoms and coccolithophores)
attribute	NC_GLOBAL	version	String	1
attribute	NC_GLOBAL	xml_source	String	osprey2erddap.update_xml() v1.3
variable	Particle_type		String
attribute	Particle_type	bcodmo_name	String	unknown
attribute	Particle_type	description	String	radionuclide type
attribute	Particle_type	long_name	String	Particle Type
attribute	Particle_type	units	String	unitless
variable	Be		float
attribute	Be	_FillValue	float	NaN
attribute	Be	actual_range	float	4.93, 7.23
attribute	Be	bcodmo_name	String	radioactive_isotope_conc
attribute	Be	description	String	activity concentration of Be as traditional partition coefficients
attribute	Be	long_name	String	Be
attribute	Be	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Be	units	String	kilogram per liter (kg/L)
variable	Be_sd		float
attribute	Be_sd	_FillValue	float	NaN
attribute	Be_sd	actual_range	float	0.01, 0.11
attribute	Be_sd	bcodmo_name	String	radioactive_isotope_conc
attribute	Be_sd	colorBarMaximum	double	50.0
attribute	Be_sd	colorBarMinimum	double	0.0
attribute	Be_sd	description	String	Standard deviation of Be activity concentration as traditional partition coefficients
attribute	Be_sd	long_name	String	Be Sd
attribute	Be_sd	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Be_sd	units	String	kilogram per liter (kg/L)
variable	Pa		float
attribute	Pa	_FillValue	float	NaN
attribute	Pa	actual_range	float	5.23, 6.71
attribute	Pa	bcodmo_name	String	radioactive_isotope_conc
attribute	Pa	description	String	activity concentration of Pa as traditional partition coefficients
attribute	Pa	long_name	String	Pa
attribute	Pa	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Pa	units	String	kilogram per liter (kg/L)
variable	Pa_sd		float
attribute	Pa_sd	_FillValue	float	NaN
attribute	Pa_sd	actual_range	float	0.0, 0.16
attribute	Pa_sd	bcodmo_name	String	radioactive_isotope_conc
attribute	Pa_sd	colorBarMaximum	double	50.0
attribute	Pa_sd	colorBarMinimum	double	0.0
attribute	Pa_sd	description	String	Standard deviation of Pa activity concentration as traditional partition coefficients
attribute	Pa_sd	long_name	String	Pa Sd
attribute	Pa_sd	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Pa_sd	units	String	kilogram per liter (kg/L)
variable	Th		float
attribute	Th	_FillValue	float	NaN
attribute	Th	actual_range	float	4.78, 6.69
attribute	Th	bcodmo_name	String	radioactive_isotope_conc
attribute	Th	description	String	activity concentration of Th as traditional partition coefficients
attribute	Th	long_name	String	TH
attribute	Th	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Th	units	String	kilogram per liter (kg/L)
variable	Th_sd		float
attribute	Th_sd	_FillValue	float	NaN
attribute	Th_sd	actual_range	float	0.01, 0.17
attribute	Th_sd	bcodmo_name	String	radioactive_isotope_conc
attribute	Th_sd	colorBarMaximum	double	50.0
attribute	Th_sd	colorBarMinimum	double	0.0
attribute	Th_sd	description	String	Standard deviation of Th activity concentration as traditional partition coefficients
attribute	Th_sd	long_name	String	TH SD
attribute	Th_sd	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Th_sd	units	String	kilogram per liter (kg/L)
variable	Po		float
attribute	Po	_FillValue	float	NaN
attribute	Po	actual_range	float	4.47, 4.92
attribute	Po	bcodmo_name	String	radioactive_isotope_conc
attribute	Po	description	String	activity concentration of Po as traditional partition coefficients
attribute	Po	long_name	String	Po
attribute	Po	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Po	units	String	kilogram per liter (kg/L)
variable	Po_sd		float
attribute	Po_sd	_FillValue	float	NaN
attribute	Po_sd	actual_range	float	0.01, 0.11
attribute	Po_sd	bcodmo_name	String	radioactive_isotope_conc
attribute	Po_sd	colorBarMaximum	double	50.0
attribute	Po_sd	colorBarMinimum	double	0.0
attribute	Po_sd	description	String	Standard deviation of Po activity concentration as traditional partition coefficients
attribute	Po_sd	long_name	String	Po Sd
attribute	Po_sd	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Po_sd	units	String	kilogram per liter (kg/L)
variable	Pb		float
attribute	Pb	_FillValue	float	NaN
attribute	Pb	actual_range	float	4.44, 5.86
attribute	Pb	bcodmo_name	String	radioactive_isotope_conc
attribute	Pb	description	String	activity concentration of Pb as traditional partition coefficients
attribute	Pb	long_name	String	PB
attribute	Pb	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Pb	units	String	kilogram per liter (kg/L)
variable	Pb_sd		float
attribute	Pb_sd	_FillValue	float	NaN
attribute	Pb_sd	actual_range	float	0.03, 0.13
attribute	Pb_sd	bcodmo_name	String	radioactive_isotope_conc
attribute	Pb_sd	colorBarMaximum	double	50.0
attribute	Pb_sd	colorBarMinimum	double	0.0
attribute	Pb_sd	description	String	Standard deviation of Pb activity concentration as traditional partition coefficients
attribute	Pb_sd	long_name	String	PB SD
attribute	Pb_sd	nerc_identifier	String	https://vocab.nerc.ac.uk/collection/P02/current/WRAD/
attribute	Pb_sd	units	String	kilogram per liter (kg/L)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.