bcodmo_dataset_906740_v1

Name: [Microbiome dynamics of coral reef and cleanerfish] - Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 (Collaborative Research: Cleaning stations as hubs for the maintenance and recovery of microbial diversity on coral reefs.)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Microbiome dynamics of coral reef and cleanerfish] - Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 (Collaborative Research: Cleaning stations as hubs for the maintenance and recovery of microbial diversity on coral reefs.)		M	background			BCO-DMO	bcodmo_dataset_906740_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.906740.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-64.8109
attribute	NC_GLOBAL	geospatial_lon_max	double	-64.8109
attribute	NC_GLOBAL	geospatial_lon_min	double	-80.81375
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/906740
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	summary	String	Coral reefs host some of the most iconic symbiotic interactions in nature and are host to the highest diversity of life on the planet. Cleaning symbiosis, wherein small fish or shrimp remove external parasites and associated microorganisms from specific clients, is common on coral reefs. Sites on the reef occupied by cleaners, or "cleaning stations", attract a wide variety of fish species that engage in direct physical contact with the cleaner. In this study, we used a combination of ecological surveys, in situ manipulations, and laboratory experiments to examine the unique features of cleaning stations to understand transfer of bacterial and archaeal symbionts amongst fish and within coral reef environment. We used microbial 16S rRNA gene amplicons, environmental parameters, and other molecular tools to evaluate the dynamics between coral microbiomes, cleanerfish skin microbiomes, and the environment. This dataset contains metadata describing sequenced samples, including sample name, data deposition accession records, and measurements at the time of sample collection.
attribute	NC_GLOBAL	title	String	[Microbiome dynamics of coral reef and cleanerfish] - Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 (Collaborative Research: Cleaning stations as hubs for the maintenance and recovery of microbial diversity on coral reefs.)
attribute	NC_GLOBAL	Westernmost_Easting	double	-80.81375
variable	BioProject_accession		String
attribute	BioProject_accession	long_name	String	Bioproject_accession
attribute	BioProject_accession	units	String	unitless
variable	BioSample_accession		String
attribute	BioSample_accession	long_name	String	Biosample_accession
attribute	BioSample_accession	units	String	unitless
variable	sample_name		String
attribute	sample_name	long_name	String	Sample_name
attribute	sample_name	units	String	unitless
variable	SRA_accession		String
attribute	SRA_accession	long_name	String	Sra_accession
attribute	SRA_accession	units	String	unitless
variable	collection_date		String
attribute	collection_date	long_name	String	Collection_date
attribute	collection_date	units	String	unitless
variable	geo_loc_name		String
attribute	geo_loc_name	long_name	String	Geo_loc_name
attribute	geo_loc_name	units	String	unitless
variable	host		String
attribute	host	long_name	String	Host
attribute	host	units	String	unitless
variable	lat		float
attribute	lat	actual_range	float	17.7734, 24.82614
attribute	lat	long_name	String	Lat
attribute	lat	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-80.81375, -64.8109
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	isolation_source		String
attribute	isolation_source	long_name	String	Isolation_source
attribute	isolation_source	units	String	unitless
variable	host_common_name		String
attribute	host_common_name	long_name	String	Host_common_name
attribute	host_common_name	units	String	unitless
variable	host_disease		String
attribute	host_disease	long_name	String	Host_disease
attribute	host_disease	units	String	unitless
variable	host_condition		String
attribute	host_condition	long_name	String	Host_condition
attribute	host_condition	units	String	unitless
variable	host_coral_cleaner_goby_pretreatment		String
attribute	host_coral_cleaner_goby_pretreatment	long_name	String	Host_coral_cleaner_goby_pretreatment
attribute	host_coral_cleaner_goby_pretreatment	units	String	unitless
variable	host_coral_reef_id		String
attribute	host_coral_reef_id	long_name	String	Host_coral_reef_id
attribute	host_coral_reef_id	units	String	unitless
variable	location_survey_date		String
attribute	location_survey_date	long_name	String	Location_survey_date
attribute	location_survey_date	units	String	unitless
variable	location_mean_total_species		float
attribute	location_mean_total_species	actual_range	float	0.0, 3.666667
attribute	location_mean_total_species	long_name	String	Location_mean_total_species
attribute	location_mean_total_species	units	String	unitless
variable	FCM_Pro_mL		float
attribute	FCM_Pro_mL	actual_range	float	1601.96, 255552.0
attribute	FCM_Pro_mL	long_name	String	Fcm_pro_ml
attribute	FCM_Pro_mL	units	String	cells per milliliter (cells/mL)
variable	FCM_Syn_mL		float
attribute	FCM_Syn_mL	actual_range	float	22466.83, 84431.17
attribute	FCM_Syn_mL	long_name	String	Fcm_syn_ml
attribute	FCM_Syn_mL	units	String	cells per milliliter (cells/mL)
variable	FCM_Peuk_mL		float
attribute	FCM_Peuk_mL	actual_range	float	1181.774, 4136.208
attribute	FCM_Peuk_mL	long_name	String	Fcm_peuk_ml
attribute	FCM_Peuk_mL	units	String	cells per milliliter (cells/mL)
variable	FCM_Hbac_mL		float
attribute	FCM_Hbac_mL	actual_range	float	593263.6, 914023.3
attribute	FCM_Hbac_mL	long_name	String	Fcm_hbac_ml
attribute	FCM_Hbac_mL	units	String	cells per milliliter (cells/mL)
variable	NPOC_uM		float
attribute	NPOC_uM	actual_range	float	70.05134, 257.6029
attribute	NPOC_uM	long_name	String	Npoc_um
attribute	NPOC_uM	units	String	micromolar (uM)
variable	TN_uM		float
attribute	TN_uM	actual_range	float	5.411319, 11.66622
attribute	TN_uM	long_name	String	Tn_um
attribute	TN_uM	units	String	micromolar (uM)
variable	phosphate		float
attribute	phosphate	actual_range	float	0.0755, 0.1634
attribute	phosphate	long_name	String	Phosphate
attribute	phosphate	units	String	micromolar (uM)
variable	nitrate_nitrite		float
attribute	nitrate_nitrite	actual_range	float	0.0851, 1.259
attribute	nitrate_nitrite	long_name	String	Nitrate_nitrite
attribute	nitrate_nitrite	units	String	micromolar (uM)
variable	silicate		float
attribute	silicate	actual_range	float	1.0046, 4.2762
attribute	silicate	long_name	String	Silicate
attribute	silicate	units	String	micromolar (uM)
variable	NO2		float
attribute	NO2	actual_range	float	-0.0049, 0.0764
attribute	NO2	long_name	String	No2
attribute	NO2	units	String	micromolar (uM)
variable	ammonium		float
attribute	ammonium	actual_range	float	0.2235, 0.8573
attribute	ammonium	long_name	String	Ammonium
attribute	ammonium	units	String	micromolar (uM)
variable	nitrate		float
attribute	nitrate	actual_range	float	0.0881, 1.2039
attribute	nitrate	long_name	String	Nitrate
attribute	nitrate	units	String	micromolar (uM)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.