bcodmo_dataset_949788_v1

Name: [PUPCYCLE 2019 incubation experiments] - Incubation experiments to assess the physiological and molecular response of subsurface phytoplankton communities to a simulation of the Upwelling Conveyor Belt Cycle (UCBC) conducted in summer 2019 onboard the R/V Oceanus (OC1905b) (CAREER: An integrated molecular and physiological approach to examining the dynamics of upwelled phytoplankton in current and changing oceans)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[PUPCYCLE 2019 incubation experiments] - Incubation experiments to assess the physiological and molecular response of subsurface phytoplankton communities to a simulation of the Upwelling Conveyor Belt Cycle (UCBC) conducted in summer 2019 onboard the R/V Oceanus (OC1905b) (CAREER: An integrated molecular and physiological approach to examining the dynamics of upwelled phytoplankton in current and changing oceans)		F I M	background			BCO-DMO	bcodmo_dataset_949788_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.949788.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-121.5429
attribute	NC_GLOBAL	geospatial_lat_max	double	41.01471
attribute	NC_GLOBAL	geospatial_lat_min	double	35.92353
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-121.5429
attribute	NC_GLOBAL	geospatial_lon_min	double	-124.4163
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://osprey.bco-dmo.org/dataset/949788
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	41.01471
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	35.92353
attribute	NC_GLOBAL	summary	String	The primary objective of this study was to assess the physiological and molecular response of subsurface phytoplankton communities to a simulation of the Upwelling Conveyor Belt Cycle (UCBC). To capture this phenomenon, we performed on-deck incubation experiments that spanned different time points representing the different stages of growth (initial deep-water community at T0, and stimulated growth phases at T1 and T2). We further subjected the incubations to various Fe-related treatments to test how Fe might play a role in determining their physiological and molecular response to upwelling. The first incubation was conducted from 27 May to 01 June 2019 in a wide continental shelf, and the second incubation was conducted from 02 June to 06 June 2019 in a narrow continental shelf. For each time point, the incubation was harvested and analyzed for chlorophyll, nutrients, particulate organic carbon and nitrogen, and dissolved and particulate Fe and Sc concentrations. 6-hour incubations using trace concentrations of stable isotopes of 13C and 15N were also conducted to assess uptake kinetics of dissolved inorganic carbon (DIC) and nitrate (NO3) in bulk-size fractionated phytoplankton communities. PUPCYCLE I (Phytoplankton response to the UPwelling CYCLE) took place in summer 2019 onboard the R/V Oceanus (OC1905b), led by Chief Scientist Adrian Marchetti.
attribute	NC_GLOBAL	title	String	[PUPCYCLE 2019 incubation experiments] - Incubation experiments to assess the physiological and molecular response of subsurface phytoplankton communities to a simulation of the Upwelling Conveyor Belt Cycle (UCBC) conducted in summer 2019 onboard the R/V Oceanus (OC1905b) (CAREER: An integrated molecular and physiological approach to examining the dynamics of upwelled phytoplankton in current and changing oceans)
attribute	NC_GLOBAL	Westernmost_Easting	double	-124.4163
variable	Experiment		String
attribute	Experiment	long_name	String	Experiment
attribute	Experiment	units	String	unitless
variable	Time_Point		String
attribute	Time_Point	long_name	String	Time_point
attribute	Time_Point	units	String	unitless
variable	Hours		int
attribute	Hours	actual_range	int	0, 120
attribute	Hours	long_name	String	Hours
attribute	Hours	units	String	hours
variable	Treatment		String
attribute	Treatment	long_name	String	Treatment
attribute	Treatment	units	String	unitless
variable	Replicate		String
attribute	Replicate	long_name	String	Replicate
attribute	Replicate	units	String	unitless
variable	Sample_Name		String
attribute	Sample_Name	long_name	String	Sample_name
attribute	Sample_Name	units	String	unitless
variable	Date		String
attribute	Date	long_name	String	Date
attribute	Date	units	String	unitless
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	35.92353, 41.01471
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-124.4163, -121.5429
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	NO3		float
attribute	NO3	actual_range	float	-0.023, 22.1
attribute	NO3	long_name	String	No3
attribute	NO3	units	String	micromolar (uM)
variable	PO4		float
attribute	PO4	actual_range	float	0.194, 2.33
attribute	PO4	long_name	String	Po4
attribute	PO4	units	String	micromolar (uM)
variable	SiOH4		float
attribute	SiOH4	actual_range	float	0.0, 34.5
attribute	SiOH4	long_name	String	Sioh4
attribute	SiOH4	units	String	micromolar (uM)
variable	chl_a_gt_5um		float
attribute	chl_a_gt_5um	actual_range	float	0.0138918, 14.84532
attribute	chl_a_gt_5um	long_name	String	Chl_a_gt_5um
attribute	chl_a_gt_5um	units	String	micrograms per liter (ug/L)
variable	chl_a_GFF		float
attribute	chl_a_GFF	actual_range	float	-0.0212898, 1.55358
attribute	chl_a_GFF	long_name	String	Chl_a_gff
attribute	chl_a_GFF	units	String	micrograms per liter (ug/L)
variable	chl_a_Total		float
attribute	chl_a_Total	actual_range	float	0.0166866, 11.85324
attribute	chl_a_Total	long_name	String	Chl_a_total
attribute	chl_a_Total	units	String	micrograms per liter (ug/L)
variable	Fv_Fm		float
attribute	Fv_Fm	actual_range	float	0.279, 0.611
attribute	Fv_Fm	long_name	String	Fv_fm
attribute	Fv_Fm	units	String	unitless
variable	Sigma		int
attribute	Sigma	actual_range	int	248, 1005
attribute	Sigma	long_name	String	Sigma
attribute	Sigma	units	String	unitless
variable	PON_gt_5um		float
attribute	PON_gt_5um	actual_range	float	0.1518217, 18.35824
attribute	PON_gt_5um	long_name	String	Pon_gt_5um
attribute	PON_gt_5um	units	String	micromoles per liter (umol/L)
variable	PON_GFF		float
attribute	PON_GFF	actual_range	float	0.2347731, 4.86793
attribute	PON_GFF	long_name	String	Pon_gff
attribute	PON_GFF	units	String	micromoles per liter (umol/L)
variable	PON_Total		float
attribute	PON_Total	actual_range	float	0.3969211, 20.2548
attribute	PON_Total	long_name	String	Pon_total
attribute	PON_Total	units	String	micromoles per liter (umol/L)
variable	POC_gt_5um		float
attribute	POC_gt_5um	actual_range	float	-0.4438948, 185.2285
attribute	POC_gt_5um	long_name	String	Poc_gt_5um
attribute	POC_gt_5um	units	String	micromoles per liter (umol/L)
variable	POC_GFF		float
attribute	POC_GFF	actual_range	float	-0.0020471, 28.16849
attribute	POC_GFF	long_name	String	Poc_gff
attribute	POC_GFF	units	String	micromoles per liter (umol/L)
variable	POC_Total		float
attribute	POC_Total	actual_range	float	0.0690021, 196.2137
attribute	POC_Total	long_name	String	Poc_total
attribute	POC_Total	units	String	micromoles per liter (umol/L)
variable	N_Uptake_gt_5um		float
attribute	N_Uptake_gt_5um	actual_range	float	0.0176493, 9.650486
attribute	N_Uptake_gt_5um	long_name	String	N_uptake_gt_5um
attribute	N_Uptake_gt_5um	units	String	micromoles per liter per day (umol/L/day)
variable	N_Uptake_GFF		float
attribute	N_Uptake_GFF	actual_range	float	0.0162029, 1.384334
attribute	N_Uptake_GFF	long_name	String	N_uptake_gff
attribute	N_Uptake_GFF	units	String	micromoles per liter per day (umol/L/day)
variable	N_Uptake_Total		float
attribute	N_Uptake_Total	actual_range	float	0.0392619, 10.06306
attribute	N_Uptake_Total	long_name	String	N_uptake_total
attribute	N_Uptake_Total	units	String	micromoles per liter per day (umol/L/day)
variable	Biomass_normalized_N_Uptake_gt_5um		float
attribute	Biomass_normalized_N_Uptake_gt_5um	actual_range	float	0.0505332, 0.900757
attribute	Biomass_normalized_N_Uptake_gt_5um	long_name	String	Biomass_normalized_n_uptake_gt_5um
attribute	Biomass_normalized_N_Uptake_gt_5um	units	String	per day
variable	Biomass_normalized_N_Uptake_GFF		float
attribute	Biomass_normalized_N_Uptake_GFF	actual_range	float	0.0426665, 0.4607246
attribute	Biomass_normalized_N_Uptake_GFF	long_name	String	Biomass_normalized_n_uptake_gff
attribute	Biomass_normalized_N_Uptake_GFF	units	String	per day
variable	Biomass_normalized_N_Uptake_Total		float
attribute	Biomass_normalized_N_Uptake_Total	actual_range	float	0.1179996, 1.292037
attribute	Biomass_normalized_N_Uptake_Total	long_name	String	Biomass_normalized_n_uptake_total
attribute	Biomass_normalized_N_Uptake_Total	units	String	per day
variable	C_Uptake_5um		float
attribute	C_Uptake_5um	actual_range	float	-0.0439365, 226.1147
attribute	C_Uptake_5um	long_name	String	C_uptake_5um
attribute	C_Uptake_5um	units	String	micromoles per liter per day (umol/L/day)
variable	C_Uptake_GFF		float
attribute	C_Uptake_GFF	actual_range	float	-1.76E-4, 26.58769
attribute	C_Uptake_GFF	long_name	String	C_uptake_gff
attribute	C_Uptake_GFF	units	String	micromoles per liter per day (umol/L/day)
variable	C_Uptake_Total		float
attribute	C_Uptake_Total	actual_range	float	-0.0045826, 231.3316
attribute	C_Uptake_Total	long_name	String	C_uptake_total
attribute	C_Uptake_Total	units	String	micromoles per liter per day (umol/L/day)
variable	Biomass_normalized_C_Uptake_gt_5um		float
attribute	Biomass_normalized_C_Uptake_gt_5um	actual_range	float	0.0166, 1.5902
attribute	Biomass_normalized_C_Uptake_gt_5um	long_name	String	Biomass_normalized_c_uptake_gt_5um
attribute	Biomass_normalized_C_Uptake_gt_5um	units	String	per day
variable	Biomass_normalized_C_Uptake_GFF		float
attribute	Biomass_normalized_C_Uptake_GFF	actual_range	float	0.0128, 0.9587
attribute	Biomass_normalized_C_Uptake_GFF	long_name	String	Biomass_normalized_c_uptake_gff
attribute	Biomass_normalized_C_Uptake_GFF	units	String	per day
variable	Biomass_normalized_C_Uptake_Total		float
attribute	Biomass_normalized_C_Uptake_Total	actual_range	float	0.0293456, 2.308585
attribute	Biomass_normalized_C_Uptake_Total	long_name	String	Biomass_normalized_c_uptake_total
attribute	Biomass_normalized_C_Uptake_Total	units	String	per day
variable	Particulate_DA		float
attribute	Particulate_DA	actual_range	float	0.027, 12.402
attribute	Particulate_DA	long_name	String	Particulate_da
attribute	Particulate_DA	units	String	micrograms per liter (ug/L)
variable	Dissolved_DA		float
attribute	Dissolved_DA	actual_range	float	0.0, 12.91
attribute	Dissolved_DA	long_name	String	Dissolved_da
attribute	Dissolved_DA	units	String	micrograms per liter (ug/L)
variable	Dissolved_Y		float
attribute	Dissolved_Y	actual_range	float	101.0231, 194.4722
attribute	Dissolved_Y	long_name	String	Dissolved_y
attribute	Dissolved_Y	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_Cd		float
attribute	Dissolved_Cd	actual_range	float	100.3228, 796.1678
attribute	Dissolved_Cd	long_name	String	Dissolved_cd
attribute	Dissolved_Cd	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_La		float
attribute	Dissolved_La	actual_range	float	15.88603, 51.45339
attribute	Dissolved_La	long_name	String	Dissolved_la
attribute	Dissolved_La	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_Pb		float
attribute	Dissolved_Pb	actual_range	float	16.29469, 82.12563
attribute	Dissolved_Pb	long_name	String	Dissolved_pb
attribute	Dissolved_Pb	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_Ce		float
attribute	Dissolved_Ce	actual_range	float	5.275867, 38.30345
attribute	Dissolved_Ce	long_name	String	Dissolved_ce
attribute	Dissolved_Ce	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_Sc		float
attribute	Dissolved_Sc	actual_range	float	0.791731, 13.88508
attribute	Dissolved_Sc	long_name	String	Dissolved_sc
attribute	Dissolved_Sc	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_Mn		float
attribute	Dissolved_Mn	actual_range	float	0.918466, 10.77443
attribute	Dissolved_Mn	long_name	String	Dissolved_mn
attribute	Dissolved_Mn	units	String	nanomoles per kilogram (nmol/kg)
variable	Dissolved_Co		float
attribute	Dissolved_Co	actual_range	float	62.46153, 563.6546
attribute	Dissolved_Co	long_name	String	Dissolved_co
attribute	Dissolved_Co	units	String	picomoles per kilogram (pmol/kg)
variable	Dissolved_Ni		float
attribute	Dissolved_Ni	actual_range	float	3.041688, 10.87644
attribute	Dissolved_Ni	long_name	String	Dissolved_ni
attribute	Dissolved_Ni	units	String	nanomoles per kilogram (nmol/kg)
variable	Dissolved_Cu		float
attribute	Dissolved_Cu	actual_range	float	0.7565952, 8.093715
attribute	Dissolved_Cu	long_name	String	Dissolved_cu
attribute	Dissolved_Cu	units	String	nanomoles per kilogram (nmol/kg)
variable	Dissolved_Zn		float
attribute	Dissolved_Zn	actual_range	float	0.1360039, 5.341446
attribute	Dissolved_Zn	long_name	String	Dissolved_zn
attribute	Dissolved_Zn	units	String	nanomoles per kilogram (nmol/kg)
variable	Dissolved_Fe		float
attribute	Dissolved_Fe	actual_range	float	0.055, 6.038
attribute	Dissolved_Fe	long_name	String	Dissolved_fe
attribute	Dissolved_Fe	units	String	nanomoles per kilogram (nmol/kg)
variable	Particulate_Fe_pFe_leached_gt_5um		float
attribute	Particulate_Fe_pFe_leached_gt_5um	actual_range	float	0.181, 16.306
attribute	Particulate_Fe_pFe_leached_gt_5um	long_name	String	Particulate_fe_pfe_leached_gt_5um
attribute	Particulate_Fe_pFe_leached_gt_5um	units	String	nanomoles per kilogram (nmol/kg)
variable	Fe_N_ratio		float
attribute	Fe_N_ratio	actual_range	float	0.0218, 4.6151
attribute	Fe_N_ratio	long_name	String	Fe_n_ratio
attribute	Fe_N_ratio	units	String	unitless
variable	Fe_uptake_lt_5um		float
attribute	Fe_uptake_lt_5um	actual_range	float	0.0, 0.897
attribute	Fe_uptake_lt_5um	long_name	String	Fe_uptake_lt_5um
attribute	Fe_uptake_lt_5um	units	String	picomoles Fe per liter per hour (pmol Fe/L/h)
variable	Fe_uptake_gt_5um		float
attribute	Fe_uptake_gt_5um	actual_range	float	0.021, 0.687
attribute	Fe_uptake_gt_5um	long_name	String	Fe_uptake_gt_5um
attribute	Fe_uptake_gt_5um	units	String	picomoles Fe per liter per hour (pmol Fe/L/h)
variable	Fe_uptake_lt_5um_pmol_Fe_ug_Chla_h		float
attribute	Fe_uptake_lt_5um_pmol_Fe_ug_Chla_h	actual_range	float	0.288, 26.573
attribute	Fe_uptake_lt_5um_pmol_Fe_ug_Chla_h	long_name	String	Fe_uptake_lt_5um_pmol_fe_ug_chla_h
attribute	Fe_uptake_lt_5um_pmol_Fe_ug_Chla_h	units	String	picomoles Fe per microgram chla per hour (pmol Fe/ug Chla/h)
variable	Fe_uptake_gt_5um_pmol_Fe_ug_Chla_h		float
attribute	Fe_uptake_gt_5um_pmol_Fe_ug_Chla_h	actual_range	float	0.005, 22.598
attribute	Fe_uptake_gt_5um_pmol_Fe_ug_Chla_h	long_name	String	Fe_uptake_gt_5um_pmol_fe_ug_chla_h
attribute	Fe_uptake_gt_5um_pmol_Fe_ug_Chla_h	units	String	picomoles Fe per microgram chla per hour (pmol Fe/ug Chla/h)
variable	Fe_uptake_lt_5um_pmol_Fe_umol_POC_h		float
attribute	Fe_uptake_lt_5um_pmol_Fe_umol_POC_h	actual_range	float	0.019, 0.648
attribute	Fe_uptake_lt_5um_pmol_Fe_umol_POC_h	long_name	String	Fe_uptake_lt_5um_pmol_fe_umol_poc_h
attribute	Fe_uptake_lt_5um_pmol_Fe_umol_POC_h	units	String	picomoles Fe per micromole POC per hour (pmol Fe/umol POC/h)
variable	Fe_uptake_gt_5um_pmol_Fe_umol_POC_h		float
attribute	Fe_uptake_gt_5um_pmol_Fe_umol_POC_h	actual_range	float	0.001, 0.697
attribute	Fe_uptake_gt_5um_pmol_Fe_umol_POC_h	long_name	String	Fe_uptake_gt_5um_pmol_fe_umol_poc_h
attribute	Fe_uptake_gt_5um_pmol_Fe_umol_POC_h	units	String	picomoles Fe per micromole POC per hour (pmol Fe/umol POC/h)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.