ERDDAP > info > bcodmo_dataset_953999_v1

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[16S microbiome data for artificial reef sponges and seawater] - 16S microbiome metadata collected from shallow artificial reef sponges and seawater in the Florida Keys, USA from Apr 2021 to Aug 2021 (Collaborative Research: Investigations into microbially mediated ecological diversification in sponges)		F   I   M	background			BCO-DMO	bcodmo_dataset_953999_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.953999.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-81.39122
attribute	NC_GLOBAL	geospatial_lat_max	double	24.56779
attribute	NC_GLOBAL	geospatial_lat_min	double	24.56779
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-81.39122
attribute	NC_GLOBAL	geospatial_lon_min	double	-81.39122
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/953999
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	24.56779
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	24.56779
attribute	NC_GLOBAL	summary	String	Sponges are a dominant component of coral reefs worldwide and in the Caribbean, where their biomass exceeds that of reef-building corals. For almost a quarter century, the success of sponges in the Caribbean has been linked to their filter-feeding ability. However, recent work demonstrated that coexisting sponges on Caribbean reefs host unique communities of bacteria that might allow sponges to access multiple pools of nutrients that are not available to other organisms. In this project, the investigators will test the hypothesis that ecologically dominant sponge species in the Caribbean have unique metabolic strategies that are mediated by their associations with microbes that live within the sponge body. In this dataset, we present the 16S rRNA microbiome NCBI accession and sample collection metadata for an artificial reef experiment where sponges of 10 species were placed on this temporary reef from April to August of 2021 and sampled using VacuSIP. VacuSIP methods capture incurrent (In) and excurrent (Ex) water from each sponge specimen. Incurrent represents the bacteria that are available for the sponge to consume via filter feeding and excurrent represents the bacteria that remain once sponges have consumed their preferred taxa. Additionally, we have provided microbiome metadata for the host sponges for several of these paired In/Ex samples. See the related dataset, NCBI Bioproject PRJNA1179970, for all sequence data. Microbiome data was generated using protocols from the Earth Microbiome project and sequencing was conducted on an Illumina MiSeq at Middle Tennessee State University. The data available at NCBI represents raw sequencing data, and no quality checks or sequencing filtering has been done on the uploaded sequences.
attribute	NC_GLOBAL	title	String	[16S microbiome data for artificial reef sponges and seawater] - 16S microbiome metadata collected from shallow artificial reef sponges and seawater in the Florida Keys, USA from Apr 2021 to Aug 2021 (Collaborative Research: Investigations into microbially mediated ecological diversification in sponges)
attribute	NC_GLOBAL	Westernmost_Easting	double	-81.39122
variable	collection_date		String
attribute	collection_date	long_name	String	Collection_date
attribute	collection_date	units	String	unitless
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	24.56779, 24.56779
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-81.39122, -81.39122
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	accession		String
attribute	accession	long_name	String	Accession
attribute	accession	units	String	unitless
variable	sample_name		String
attribute	sample_name	long_name	String	Sample_name
attribute	sample_name	units	String	unitless
variable	species_ab		String
attribute	species_ab	long_name	String	Species_ab
attribute	species_ab	units	String	unitless
variable	sample_type		String
attribute	sample_type	long_name	String	Sample_type
attribute	sample_type	units	String	unitless
variable	organism		String
attribute	organism	long_name	String	Organism
attribute	organism	units	String	unitless
variable	AphiaID		String
attribute	AphiaID	long_name	String	Aphiaid
attribute	AphiaID	units	String	unitless
variable	LSID		String
attribute	LSID	long_name	String	Lsid
attribute	LSID	units	String	unitless
variable	isolation_source		String
attribute	isolation_source	long_name	String	Isolation_source
attribute	isolation_source	units	String	unitless
variable	geo_loc_name		String
attribute	geo_loc_name	long_name	String	Geo_loc_name
attribute	geo_loc_name	units	String	unitless
variable	data_day		int
attribute	data_day	actual_range	int	0, 6
attribute	data_day	long_name	String	Data_day
attribute	data_day	units	String	days
variable	seq_attempt		String
attribute	seq_attempt	long_name	String	Seq_attempt
attribute	seq_attempt	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.