bcodmo_dataset_963210_v1

Name: [Diel multi 'omics] - Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of O'ahu, Hawai'i from December 2020 to August 2021 (From Signatures of Translational Regulation to Outcomes of Natural Selection: Evolution of Marine Microbes in Changing Environments)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Diel multi 'omics] - Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of O'ahu, Hawai'i from December 2020 to August 2021 (From Signatures of Translational Regulation to Outcomes of Natural Selection: Evolution of Marine Microbes in Changing Environments)		F I M	background			BCO-DMO	bcodmo_dataset_963210_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	defaultDataQuery	String	&time<now
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.963210.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-157.7663
attribute	NC_GLOBAL	geospatial_lat_max	double	21.4829
attribute	NC_GLOBAL	geospatial_lat_min	double	21.43688
attribute	NC_GLOBAL	geospatial_lat_units	String	degrees_north
attribute	NC_GLOBAL	geospatial_lon_max	double	-157.7663
attribute	NC_GLOBAL	geospatial_lon_min	double	-157.8033
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	geospatial_vertical_max	double	2.064
attribute	NC_GLOBAL	geospatial_vertical_min	double	0.116
attribute	NC_GLOBAL	geospatial_vertical_positive	String	down
attribute	NC_GLOBAL	geospatial_vertical_units	String	m
attribute	NC_GLOBAL	infoUrl	String	https://osprey.bco-dmo.org/dataset/963210
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	Northernmost_Northing	double	21.4829
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	Southernmost_Northing	double	21.43688
attribute	NC_GLOBAL	summary	String	This dataset contains biogeochemical data, sampling information, and genetic accession identifiers for the Hawaiʻi Diel Sampling (HaDS) survey in Kāneʻohe Bay and adjacent offshore waters of O'ahu, Hawai'i from December 2020 to August 2021. Study description: Here, we present data from the Hawaiʻi Diel Sampling (HaDS) survey, which represents a high-resolution sampling of surface ocean microbial communities every 1.5 hours for 48 hours across two environments: Kāneʻohe Bay on the windward coast of Oʻahu, Hawaiʻi, and the adjacent offshore. At both the coastal Kāneʻohe Bay station (HP1) and the adjacent offshore station (STO1), we sampled at 33 time-points across 48 hours in August 2021, and subsequently produced 59 metatranscriptomes, 65 short-read metagenomes, 8 long-read metagenomes, and 66 metaepitranscriptomes. We also generated four deeply-sequenced short-read metagenomes from samples collected in the late fall and spring prior to HaDS through routine Kāneʻohe Bay Time-series sampling. The goal of HaDS is to characterize microbial responses to diel changes in ocean biogeochemistry and investigate mechanisms of transcriptional and translation regulation. These data were collected by Dr. A. Murat Eren of the Helmholtz Institute for Functional Marine Biodiversity.
attribute	NC_GLOBAL	time_coverage_end	String	2021-08-20T19:26:00Z
attribute	NC_GLOBAL	time_coverage_start	String	2020-12-23T19:21:00Z
attribute	NC_GLOBAL	title	String	[Diel multi 'omics] - Diel multi 'omics data from surface ocean microbial community samples collected during Hawaiʻi Diel Sampling (HaDS) in Kāneʻohe Bay and adjacent offshore waters of O'ahu, Hawai'i from December 2020 to August 2021 (From Signatures of Translational Regulation to Outcomes of Natural Selection: Evolution of Marine Microbes in Changing Environments)
attribute	NC_GLOBAL	Westernmost_Easting	double	-157.8033
variable	HADS_Universal_Sample_ID		String
attribute	HADS_Universal_Sample_ID	long_name	String	Hads_universal_sample_id
attribute	HADS_Universal_Sample_ID	units	String	unitless
variable	NCBI_BioProject		String
attribute	NCBI_BioProject	long_name	String	Ncbi_bioproject
attribute	NCBI_BioProject	units	String	unitless
variable	BioSample_accession		String
attribute	BioSample_accession	long_name	String	Biosample_accession
attribute	BioSample_accession	units	String	unitless
variable	sampleID_MTX		String
attribute	sampleID_MTX	long_name	String	Sampleid_mtx
attribute	sampleID_MTX	units	String	unitless
variable	sampleID_TRNA		String
attribute	sampleID_TRNA	long_name	String	Sampleid_trna
attribute	sampleID_TRNA	units	String	unitless
variable	sampleID_MGX		String
attribute	sampleID_MGX	long_name	String	Sampleid_mgx
attribute	sampleID_MGX	units	String	unitless
variable	sampleID_HMW		String
attribute	sampleID_HMW	long_name	String	Sampleid_hmw
attribute	sampleID_HMW	units	String	unitless
variable	Station		String
attribute	Station	long_name	String	Station
attribute	Station	units	String	unitless
variable	Date		String
attribute	Date	long_name	String	Date
attribute	Date	units	String	unitless
variable	Time_sampled		String
attribute	Time_sampled	long_name	String	Time_sampled
attribute	Time_sampled	units	String	hh:mm
variable	time		double
attribute	time	_CoordinateAxisType	String	Time
attribute	time	actual_range	double	1.60875126E9, 1.62948756E9
attribute	time	axis	String	T
attribute	time	ioos_category	String	Time
attribute	time	long_name	String	Iso_datetime_utc
attribute	time	standard_name	String	time
attribute	time	time_origin	String	01-JAN-1970 00:00:00
attribute	time	units	String	seconds since 1970-01-01T00:00:00Z
variable	latitude		float
attribute	latitude	_CoordinateAxisType	String	Lat
attribute	latitude	actual_range	float	21.43688, 21.4829
attribute	latitude	axis	String	Y
attribute	latitude	ioos_category	String	Location
attribute	latitude	long_name	String	Latitude
attribute	latitude	standard_name	String	latitude
attribute	latitude	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-157.8033, -157.7663
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Longitude
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Temp		String
attribute	Temp	long_name	String	Temp
attribute	Temp	units	String	degrees Celsius
variable	Salinity		float
attribute	Salinity	actual_range	float	33.93, 35.19
attribute	Salinity	long_name	String	Salinity
attribute	Salinity	units	String	ppt
variable	depth		float
attribute	depth	_CoordinateAxisType	String	Height
attribute	depth	_CoordinateZisPositive	String	down
attribute	depth	actual_range	float	0.116, 2.064
attribute	depth	axis	String	Z
attribute	depth	ioos_category	String	Location
attribute	depth	long_name	String	Depth
attribute	depth	positive	String	down
attribute	depth	standard_name	String	depth
attribute	depth	units	String	m
variable	pH		float
attribute	pH	actual_range	float	6.96, 8.04
attribute	pH	long_name	String	Ph
attribute	pH	units	String	pH scale
variable	PPFFR		float
attribute	PPFFR	actual_range	float	0.0, 1387.0
attribute	PPFFR	long_name	String	Ppffr
attribute	PPFFR	units	String	Micromoles of photons per square meter per second (umol/m2/s)
variable	PRO_mL		int
attribute	PRO_mL	actual_range	int	26, 283087
attribute	PRO_mL	long_name	String	Pro_ml
attribute	PRO_mL	units	String	cells per mL
variable	SYN_mL		int
attribute	SYN_mL	actual_range	int	12093, 318829
attribute	SYN_mL	long_name	String	Syn_ml
attribute	SYN_mL	units	String	cells per mL
variable	PEUK_mL		int
attribute	PEUK_mL	actual_range	int	1431, 33221
attribute	PEUK_mL	long_name	String	Peuk_ml
attribute	PEUK_mL	units	String	cells per mL
variable	HBACT_mL		int
attribute	HBACT_mL	actual_range	int	640666, 1932922
attribute	HBACT_mL	long_name	String	Hbact_ml
attribute	HBACT_mL	units	String	cells per mL
variable	chla		String
attribute	chla	long_name	String	Chla
attribute	chla	units	String	micrograms per Liter
variable	Phosphate_uM		String
attribute	Phosphate_uM	long_name	String	Phosphate_um
attribute	Phosphate_uM	units	String	micromolar (uM)
variable	Silicate_uM		String
attribute	Silicate_uM	long_name	String	Silicate_um
attribute	Silicate_uM	units	String	micromolar (uM)
variable	NitrateNitrite_uM		String
attribute	NitrateNitrite_uM	long_name	String	Nitratenitrite_um
attribute	NitrateNitrite_uM	units	String	micromolar (uM)
variable	Ammonia_uM		String
attribute	Ammonia_uM	long_name	String	Ammonia_um
attribute	Ammonia_uM	units	String	micromolar (uM)
variable	DOC_uM		String
attribute	DOC_uM	long_name	String	Doc_um
attribute	DOC_uM	units	String	micromolar (uM)
variable	TN_uM		String
attribute	TN_uM	long_name	String	Tn_um
attribute	TN_uM	units	String	micromolar (uM)
variable	MGX_SRA_accession		String
attribute	MGX_SRA_accession	long_name	String	Mgx_sra_accession
attribute	MGX_SRA_accession	units	String	unitless
variable	MGX_filename		String
attribute	MGX_filename	long_name	String	Mgx_filename
attribute	MGX_filename	units	String	unitless
variable	MGX_filename2		String
attribute	MGX_filename2	long_name	String	Mgx_filename2
attribute	MGX_filename2	units	String	unitless
variable	MTX_SRA_accession		String
attribute	MTX_SRA_accession	long_name	String	Mtx_sra_accession
attribute	MTX_SRA_accession	units	String	unitless
variable	MTX_filename		String
attribute	MTX_filename	long_name	String	Mtx_filename
attribute	MTX_filename	units	String	unitless
variable	MTX_filename2		String
attribute	MTX_filename2	long_name	String	Mtx_filename2
attribute	MTX_filename2	units	String	unitless
variable	TRNA_SRA_accession		String
attribute	TRNA_SRA_accession	long_name	String	Trna_sra_accession
attribute	TRNA_SRA_accession	units	String	unitless
variable	TRNA_filename		String
attribute	TRNA_filename	long_name	String	Trna_filename
attribute	TRNA_filename	units	String	unitless
variable	TRNA_filename2		String
attribute	TRNA_filename2	long_name	String	Trna_filename2
attribute	TRNA_filename2	units	String	unitless
variable	HMW_SRA_accession		String
attribute	HMW_SRA_accession	long_name	String	Hmw_sra_accession
attribute	HMW_SRA_accession	units	String	unitless
variable	HMW_filename		String
attribute	HMW_filename	long_name	String	Hmw_filename
attribute	HMW_filename	units	String	unitless

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.