bcodmo_dataset_911008_v1

Name: [Diatom cultures used to generate DNA reference library] - Diatom cultures used to generate DNA reference library from samples collected from sites in Alpena, Michigan and Palm Coast, Florida between July 2021 & 2022. (Collaborative Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron’s sinkholes)
Creator: BCO-DMO
License: The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.

Grid DAP Data	Sub- set	Table DAP Data	Make A Graph	W M S	Source Data Files	Acces- sible	Title	Sum- mary	FGDC, ISO, Metadata	Back- ground Info	RSS	E mail	Institution	Dataset ID
		data	graph		files	public	[Diatom cultures used to generate DNA reference library] - Diatom cultures used to generate DNA reference library from samples collected from sites in Alpena, Michigan and Palm Coast, Florida between July 2021 & 2022. (Collaborative Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron’s sinkholes)		M	background			BCO-DMO	bcodmo_dataset_911008_v1

The Dataset's Variables and Attributes

Row Type	Variable Name	Attribute Name	Data Type	Value
attribute	NC_GLOBAL	cdm_data_type	String	Other
attribute	NC_GLOBAL	Conventions	String	COARDS, CF-1.6, ACDD-1.3
attribute	NC_GLOBAL	creator_email	String	info at bco-dmo.org
attribute	NC_GLOBAL	creator_name	String	BCO-DMO
attribute	NC_GLOBAL	creator_url	String	https://www.bco-dmo.org/
attribute	NC_GLOBAL	doi	String	10.26008/1912/bco-dmo.911008.1
attribute	NC_GLOBAL	Easternmost_Easting	double	-83.32453
attribute	NC_GLOBAL	geospatial_lon_max	double	-83.32453
attribute	NC_GLOBAL	geospatial_lon_min	double	-83.45596
attribute	NC_GLOBAL	geospatial_lon_units	String	degrees_east
attribute	NC_GLOBAL	infoUrl	String	https://www.bco-dmo.org/dataset/911008
attribute	NC_GLOBAL	institution	String	BCO-DMO
attribute	NC_GLOBAL	license	String	The data may be used and redistributed for free but is not intended for legal use, since it may contain inaccuracies. Neither the data Contributor, ERD, NOAA, nor the United States Government, nor any of their employees or contractors, makes any warranty, express or implied, including warranties of merchantability and fitness for a particular purpose, or assumes any legal liability for the accuracy, completeness, or usefulness, of this information.
attribute	NC_GLOBAL	sourceUrl	String	(local files)
attribute	NC_GLOBAL	summary	String	These data are the information for each of the cultures generated from samples collected from three sites in Alpena, Michigan, one site in Monroe, Michigan, and one site in Palm Coast, Florida. Data are for cultures sequenced using Sanger sequencing and include taxonomic identification, location and water parameter information from samples used to develop the cultures, and growth medium. Each of these cultures was developed from high-sulfur, low-oxygen environments formed by underwater sinkholes and springs that create extreme habitats populated by microbial mat communities. Our study investigated previously undescribed diatom diversity in these habitats. Sequences from these cultures contribute to tying molecular data to morphologically identified isolates, providing a bridge between these two data types that can be used to improve metabarcoding analyses.
attribute	NC_GLOBAL	title	String	[Diatom cultures used to generate DNA reference library] - Diatom cultures used to generate DNA reference library from samples collected from sites in Alpena, Michigan and Palm Coast, Florida between July 2021 & 2022. (Collaborative Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron’s sinkholes)
attribute	NC_GLOBAL	Westernmost_Easting	double	-83.45596
variable	NCBI_Accession		String
attribute	NCBI_Accession	long_name	String	Ncbi_accession
attribute	NCBI_Accession	units	String	unitless
variable	Culture_ID		String
attribute	Culture_ID	long_name	String	Culture_id
attribute	Culture_ID	units	String	unitless
variable	Genus		String
attribute	Genus	long_name	String	Genus
attribute	Genus	units	String	unitless
variable	Species		String
attribute	Species	long_name	String	Species
attribute	Species	units	String	unitless
variable	Variety		String
attribute	Variety	long_name	String	Variety
attribute	Variety	units	String	unitless
variable	Collection_ID		String
attribute	Collection_ID	long_name	String	Collection_id
attribute	Collection_ID	units	String	unitless
variable	Media		String
attribute	Media	long_name	String	Media
attribute	Media	units	String	unitless
variable	Collection_Date		String
attribute	Collection_Date	long_name	String	Collection_date
attribute	Collection_Date	units	String	Month/Day/Year
variable	Location		String
attribute	Location	long_name	String	Location
attribute	Location	units	String	unitless
variable	Sample_Type		String
attribute	Sample_Type	long_name	String	Sample_type
attribute	Sample_Type	units	String	unitless
variable	Lat		float
attribute	Lat	actual_range	float	41.76795, 45.19839
attribute	Lat	long_name	String	Lat
attribute	Lat	units	String	degrees_north
variable	longitude		float
attribute	longitude	_CoordinateAxisType	String	Lon
attribute	longitude	actual_range	float	-83.45596, -83.32453
attribute	longitude	axis	String	X
attribute	longitude	ioos_category	String	Location
attribute	longitude	long_name	String	Long
attribute	longitude	standard_name	String	longitude
attribute	longitude	units	String	degrees_east
variable	Temp		float
attribute	Temp	actual_range	float	9.92, 14.36
attribute	Temp	long_name	String	Temp
attribute	Temp	units	String	Celsius (°C)
variable	Cond		int
attribute	Cond	actual_range	int	2234, 2607
attribute	Cond	long_name	String	Cond
attribute	Cond	units	String	Microsiemens / centimeter (μS/cm)
variable	TDS		float
attribute	TDS	actual_range	float	1.451, 1.689
attribute	TDS	long_name	String	Tds
attribute	TDS	units	String	Grams/liter (g/L)
variable	pH		float
attribute	pH	actual_range	float	7.04, 7.56
attribute	pH	long_name	String	Ph
attribute	pH	units	String	unitless
variable	ORP		float
attribute	ORP	actual_range	float	-203.2, 89.0
attribute	ORP	long_name	String	Orp
attribute	ORP	units	String	Millivolts (mV)
variable	NTU		float
attribute	NTU	actual_range	float	-0.2, 5.0
attribute	NTU	long_name	String	Ntu
attribute	NTU	units	String	Nephelometric Turbidity Units (NTU)
variable	ODO		float
attribute	ODO	actual_range	float	6.2, 57.5
attribute	ODO	long_name	String	Odo
attribute	ODO	units	String	Percentage saturation
variable	ODO_mg_L		float
attribute	ODO_mg_L	actual_range	float	0.69, 6.18
attribute	ODO_mg_L	long_name	String	Odo_mg_l
attribute	ODO_mg_L	units	String	Milligrams/liter (mg/L)
variable	Cl_mg_L		int
attribute	Cl_mg_L	actual_range	int	35, 79
attribute	Cl_mg_L	long_name	String	Cl_mg_l
attribute	Cl_mg_L	units	String	Milligrams/liter (mg/L)
variable	SO4_mg_L		int
attribute	SO4_mg_L	actual_range	int	803, 1327
attribute	SO4_mg_L	long_name	String	So4_mg_l
attribute	SO4_mg_L	units	String	Milligrams/liter (mg/L)
variable	NO3_N_mg_L		float
attribute	NO3_N_mg_L	actual_range	float	0.51, 0.51
attribute	NO3_N_mg_L	long_name	String	No3_n_mg_l
attribute	NO3_N_mg_L	units	String	Milligrams/liter (mg/L)
variable	Si_mg_L		float
attribute	Si_mg_L	actual_range	float	8.87, 11.8
attribute	Si_mg_L	long_name	String	Si_mg_l
attribute	Si_mg_L	units	String	Milligrams/liter (mg/L)
variable	SRP_P_mg_L		float
attribute	SRP_P_mg_L	long_name	String	Srp_p_mg_l
attribute	SRP_P_mg_L	units	String	Milligrams/liter (mg/L)

The information in the table above is also available in other file formats (.csv, .htmlTable, .itx, .json, .jsonlCSV1, .jsonlCSV, .jsonlKVP, .mat, .nc, .nccsv, .tsv, .xhtml) via a RESTful web service.